Strain Fitness in Escherichia fergusonii Becca around EFB2_02419

Experiment: BHIS_CaCl2 with hk phage cocktail 1 MOI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 with hk phage cocktail 1 MOI
2,560,051	+		EFB2_02418	0.79	+0.2
2,560,051	+		EFB2_02418	0.79	-1.0
2,560,076	+		EFB2_02418	0.80	-0.1
2,560,076	+		EFB2_02418	0.80	+3.9
2,560,097	-		EFB2_02418	0.81	+1.3
2,560,196	-		EFB2_02418	0.86	+0.1
2,560,210	+		EFB2_02418	0.86	+1.5
2,560,212	+		EFB2_02418	0.87	+0.3
2,560,213	-		EFB2_02418	0.87	+0.5
2,560,223	+		EFB2_02418	0.87	-0.3
2,560,235	+		EFB2_02418	0.88	+0.7
2,560,235	+		EFB2_02418	0.88	-0.4
2,560,236	-		EFB2_02418	0.88	-1.3
2,560,263	-		EFB2_02418	0.89	-0.5
2,560,274	+		EFB2_02418	0.90	-0.1
2,560,275	-		EFB2_02418	0.90	-0.1
2,560,275	-		EFB2_02418	0.90	-0.8
2,560,277	+		EFB2_02418	0.90	-1.0
2,560,277	+		EFB2_02418	0.90	-1.4
2,560,277	+		EFB2_02418	0.90	+0.9
2,560,277	+		EFB2_02418	0.90	+1.5
2,560,277	+		EFB2_02418	0.90	-0.4
2,560,277	+		EFB2_02418	0.90	+2.3
2,560,277	+		EFB2_02418	0.90	+0.3
2,560,278	-		EFB2_02418	0.90	-0.2
2,560,278	-		EFB2_02418	0.90	+1.5
2,560,278	-		EFB2_02418	0.90	+0.7
2,560,278	-		EFB2_02418	0.90	-0.1
2,560,278	-		EFB2_02418	0.90	+1.4
2,560,278	-		EFB2_02418	0.90	-0.3
2,560,283	+				-0.5
2,560,283	+				+1.4
2,560,283	+				+2.3
2,560,283	+				-1.1
2,560,283	+				-0.1
2,560,284	-				+0.5
2,560,284	-				+2.5
2,560,284	-				-2.6
2,560,284	-				-0.3
2,560,284	-				-0.6
2,560,284	-				+3.3
2,560,316	+				-0.3
2,560,393	+				+0.1
2,560,450	+				+0.5
2,560,450	+				-1.8
2,560,482	+				-1.6
2,560,482	+				+0.7
2,560,482	+				-1.6
2,560,482	+				+0.7
2,560,482	+				-0.7
2,560,482	+				-1.4
2,560,482	+				+1.6
2,560,483	-				-1.1
2,560,483	-				+1.2
2,560,483	-				-1.4
2,560,483	-				-0.5
2,560,483	-				-0.8
2,560,483	-				+1.7
2,560,484	+				-0.5
2,560,485	-				+0.3
2,560,485	-				-1.6
2,560,512	+				-0.4
2,560,513	-				+2.3
2,560,533	-				+0.6
2,560,534	+				+2.3
2,560,535	-				+0.7
2,560,535	-				-1.7
2,560,535	-				+0.9
2,560,540	+				+1.6
2,560,540	+				+2.3
2,560,540	+				-0.3
2,560,540	+				+0.0
2,560,541	-				-0.9
2,560,541	-				-1.3
2,560,541	-				-1.1
2,560,541	-				+1.5
2,560,541	-				+0.0
2,560,541	-				+2.1
2,560,541	-				-0.3
2,560,541	-				-1.2
2,560,576	+				+1.7
2,560,623	-				-0.5
2,560,625	-				-1.7
2,560,635	+				+1.7
2,560,640	+				-1.7
2,560,640	+				+1.2
2,560,641	-				+1.3
2,560,743	+				+0.4
2,560,766	+				+0.9
2,560,766	+				-1.0
2,560,767	-				+0.7
2,560,767	-				+0.5
2,560,777	+				+1.2
2,560,777	+				-2.7
2,560,777	+				+2.3
2,560,778	-				+0.7
2,560,778	-				+3.3
2,560,778	-				+1.1
2,560,778	-				+2.1
2,560,778	-				-2.3
2,560,778	-				+0.5
2,560,778	-				-2.3
2,560,795	+				+3.3
2,560,796	-				+0.9
2,560,796	-				+0.2
2,560,796	-				+2.8
2,560,810	+				+0.2
2,560,811	-				-1.0
2,560,843	+				+1.2
2,560,904	+				+0.8
2,560,904	+				+2.3
2,560,918	+				+0.6
2,560,954	+				-0.8
2,560,954	+				+1.3
2,560,955	-				-1.7
2,561,073	+				+2.6
2,561,073	+				-0.3
2,561,073	+				+0.0
2,561,074	-				-0.5
2,561,074	-				+0.0
2,561,077	+				-0.7
2,561,077	+				+0.6
2,561,077	+				+1.3
2,561,077	+				-0.5
2,561,077	+				+0.2
2,561,077	+				-1.6
2,561,077	+				-2.1
2,561,077	+				-0.4
2,561,077	+				+1.0
2,561,078	-				+1.7
2,561,078	-				+2.3
2,561,078	-				+0.3
2,561,078	-				-0.3
2,561,078	-				+0.2
2,561,091	+		EFB2_02419	0.11	+1.0
2,561,110	+		EFB2_02419	0.13	+1.0
2,561,122	-		EFB2_02419	0.14	+2.3
2,561,138	+		EFB2_02419	0.16	+0.7
2,561,139	-		EFB2_02419	0.16	+1.0
2,561,199	+		EFB2_02419	0.23	+0.3
2,561,199	+		EFB2_02419	0.23	+0.6
2,561,199	+		EFB2_02419	0.23	-0.5
2,561,199	+		EFB2_02419	0.23	-0.5
2,561,199	+		EFB2_02419	0.23	+1.0
2,561,199	+		EFB2_02419	0.23	+0.0
2,561,199	+		EFB2_02419	0.23	-1.1
2,561,199	+		EFB2_02419	0.23	-0.2
2,561,199	+		EFB2_02419	0.23	-0.7
2,561,199	+		EFB2_02419	0.23	+0.7
2,561,200	-		EFB2_02419	0.23	+0.7
2,561,204	+		EFB2_02419	0.24	+0.5
2,561,204	+		EFB2_02419	0.24	+2.0
2,561,204	+		EFB2_02419	0.24	+0.5
2,561,204	+		EFB2_02419	0.24	+1.3
2,561,204	+		EFB2_02419	0.24	-0.5
2,561,204	+		EFB2_02419	0.24	+0.3
2,561,205	-		EFB2_02419	0.24	+1.0
2,561,236	+		EFB2_02419	0.27	-1.7
2,561,236	+		EFB2_02419	0.27	+0.0
2,561,236	+		EFB2_02419	0.27	+0.0
2,561,236	+		EFB2_02419	0.27	-2.1
2,561,236	+		EFB2_02419	0.27	+2.9
2,561,236	+		EFB2_02419	0.27	-0.0
2,561,236	+		EFB2_02419	0.27	+0.4
2,561,236	+		EFB2_02419	0.27	+1.9
2,561,236	+		EFB2_02419	0.27	-0.7
2,561,236	+		EFB2_02419	0.27	+0.8
2,561,236	+		EFB2_02419	0.27	-0.3
2,561,236	+		EFB2_02419	0.27	-0.8
2,561,236	+		EFB2_02419	0.27	-0.7
2,561,236	+		EFB2_02419	0.27	-0.8
2,561,236	+		EFB2_02419	0.27	+2.3
2,561,236	+		EFB2_02419	0.27	-1.5
2,561,236	+		EFB2_02419	0.27	+1.2
2,561,236	+		EFB2_02419	0.27	+0.1
2,561,236	+		EFB2_02419	0.27	+0.4
2,561,236	+		EFB2_02419	0.27	+0.0
2,561,236	+		EFB2_02419	0.27	+0.4
2,561,236	+		EFB2_02419	0.27	+0.6
2,561,237	-		EFB2_02419	0.27	+0.8
2,561,237	-		EFB2_02419	0.27	+0.1
2,561,237	-		EFB2_02419	0.27	+1.8
2,561,237	-		EFB2_02419	0.27	-1.4
2,561,237	-		EFB2_02419	0.27	+0.2
2,561,237	-		EFB2_02419	0.27	-0.5
2,561,237	-		EFB2_02419	0.27	-0.3
2,561,237	-		EFB2_02419	0.27	+2.6
2,561,242	+		EFB2_02419	0.28	-0.5
2,561,242	+		EFB2_02419	0.28	+1.4
2,561,242	+		EFB2_02419	0.28	-0.6
2,561,242	+		EFB2_02419	0.28	-0.5
2,561,242	+		EFB2_02419	0.28	-0.8
2,561,242	+		EFB2_02419	0.28	-2.0
2,561,242	+		EFB2_02419	0.28	-1.3
2,561,242	+		EFB2_02419	0.28	+0.2
2,561,243	-		EFB2_02419	0.28	+0.7
2,561,243	-		EFB2_02419	0.28	-1.4
2,561,243	-		EFB2_02419	0.28	-2.1
2,561,243	-		EFB2_02419	0.28	+0.3
2,561,243	-		EFB2_02419	0.28	+2.3
2,561,259	+		EFB2_02419	0.30	+0.7
2,561,260	-		EFB2_02419	0.30	+0.7
2,561,269	+		EFB2_02419	0.31	+0.1
2,561,269	+		EFB2_02419	0.31	+0.0
2,561,384	-		EFB2_02419	0.44	+0.3
2,561,445	+		EFB2_02419	0.51	-1.5
2,561,471	+		EFB2_02419	0.54	+1.3
2,561,475	+		EFB2_02419	0.54	-0.9
2,561,475	+		EFB2_02419	0.54	+1.7
2,561,476	-		EFB2_02419	0.54	+2.1
2,561,500	+		EFB2_02419	0.57	+0.4
2,561,500	+		EFB2_02419	0.57	+2.3
2,561,515	+		EFB2_02419	0.58	+0.9
2,561,516	-		EFB2_02419	0.59	-2.3
2,561,519	+		EFB2_02419	0.59	-0.5
2,561,519	+		EFB2_02419	0.59	+0.5
2,561,520	-		EFB2_02419	0.59	-0.3
2,561,520	-		EFB2_02419	0.59	+0.0
2,561,520	-		EFB2_02419	0.59	-0.8
2,561,529	+		EFB2_02419	0.60	-0.3
2,561,541	+		EFB2_02419	0.61	+0.3
2,561,541	+		EFB2_02419	0.61	-0.7
2,561,541	+		EFB2_02419	0.61	+0.6
2,561,541	+		EFB2_02419	0.61	-0.4
2,561,541	+		EFB2_02419	0.61	+0.4
2,561,544	+		EFB2_02419	0.62	+0.6
2,561,544	+		EFB2_02419	0.62	-1.0
2,561,544	+		EFB2_02419	0.62	+0.1
2,561,544	+		EFB2_02419	0.62	-0.8
2,561,544	+		EFB2_02419	0.62	+0.0
2,561,548	-		EFB2_02419	0.62	-1.5
2,561,564	+		EFB2_02419	0.64	-0.5
2,561,564	+		EFB2_02419	0.64	+0.5
2,561,564	+		EFB2_02419	0.64	-1.6
2,561,565	-		EFB2_02419	0.64	+2.3
2,561,565	-		EFB2_02419	0.64	+2.5
2,561,565	-		EFB2_02419	0.64	+0.7
2,561,565	-		EFB2_02419	0.64	-1.0
2,561,688	+		EFB2_02419	0.78	-0.3
2,561,725	+		EFB2_02419	0.82	+1.8
2,561,734	+		EFB2_02419	0.83	+0.5
2,561,813	+				+0.5
2,561,813	+				-1.9
2,561,813	+				+1.2
2,561,813	+				+2.3
2,561,813	+				-0.4
2,561,813	+				+0.5
2,561,813	+				-0.6
2,561,813	+				-2.3
2,561,813	+				-1.3
2,561,813	+				+0.7
2,561,813	+				-2.5
2,561,813	+				+2.3
2,561,813	+				+0.7
2,561,813	+				-0.5
2,561,814	-				+0.3
2,561,814	-				+2.9
2,561,814	-				+2.8
2,561,814	-				-0.5
2,561,814	-				+1.1
2,561,814	-				+3.3
2,561,814	-				+0.9
2,561,814	-				-1.0
2,561,814	-				+0.0
2,561,814	-				+1.3
2,561,814	-				+0.6
2,561,814	-				-1.6
2,561,814	-				-0.1
2,561,883	-				-0.9
2,561,918	+				+0.2
2,561,918	+				+0.6
2,561,918	+				+0.6
2,561,919	-				-0.4
2,561,919	-				+2.6
2,561,919	-				-1.7
2,561,919	-				+0.4
2,561,919	-				+1.3
2,561,960	+				+0.4
2,561,960	+				-2.1
2,561,965	+				+1.0
2,561,965	+				+1.0
2,561,984	+				+0.3
2,561,984	+				+0.0
2,561,984	+				-0.6
2,562,011	+				+0.2
2,562,054	+				+0.3
2,562,054	+				+0.3
2,562,054	+				+1.9
2,562,055	-				+0.7
2,562,055	-				-0.6
2,562,055	-				+0.3
2,562,055	-				+0.1
2,562,055	-				+0.6
2,562,055	-				-2.1
2,562,065	-				+2.0
2,562,065	-				-0.3
2,562,092	-				+1.0
2,562,129	-		EFB2_02420	0.27	-2.5
2,562,158	-		EFB2_02420	0.57	-0.6
2,562,187	-		EFB2_02420	0.88	+1.3
2,562,187	-		EFB2_02420	0.88	+1.9
2,562,200	-				-0.7
2,562,200	-				+0.4
2,562,238	-				+1.3
2,562,266	+				+1.7
2,562,266	+				+0.6
2,562,267	-				-2.5
2,562,267	-				+1.8
2,562,269	+				-1.3
2,562,269	+				+4.3
2,562,279	-				-0.3
2,562,322	-				+0.7
2,562,406	+				-0.8
2,562,407	-				+1.2
2,562,407	-				+1.2
2,562,407	-				-0.5
2,562,441	+				-0.5
2,562,448	+		EFB2_02421	0.10	+0.7
2,562,448	+		EFB2_02421	0.10	+2.3
2,562,448	+		EFB2_02421	0.10	-1.0
2,562,448	+		EFB2_02421	0.10	+0.7
2,562,448	+		EFB2_02421	0.10	-0.8
2,562,448	+		EFB2_02421	0.10	-2.3
2,562,448	+		EFB2_02421	0.10	-0.3
2,562,449	-		EFB2_02421	0.10	-0.6
2,562,449	-		EFB2_02421	0.10	-1.7
2,562,449	-		EFB2_02421	0.10	-1.0
2,562,449	-		EFB2_02421	0.10	-0.5
2,562,449	-		EFB2_02421	0.10	+0.8
2,562,449	-		EFB2_02421	0.10	+1.6
2,562,449	-		EFB2_02421	0.10	-0.3
2,562,449	-		EFB2_02421	0.10	+1.7
2,562,449	-		EFB2_02421	0.10	-0.8
2,562,461	-		EFB2_02421	0.11	-2.8
2,562,491	-		EFB2_02421	0.14	-2.1
2,562,510	-		EFB2_02421	0.16	-1.8
2,562,537	+		EFB2_02421	0.18	+2.3
2,562,537	+		EFB2_02421	0.18	-0.8
2,562,538	-		EFB2_02421	0.18	+0.8
2,562,538	-		EFB2_02421	0.18	-1.3
2,562,552	+		EFB2_02421	0.19	+0.3
2,562,552	+		EFB2_02421	0.19	+0.4
2,562,552	+		EFB2_02421	0.19	-0.8
2,562,553	-		EFB2_02421	0.19	+1.3
2,562,553	-		EFB2_02421	0.19	+0.0
2,562,553	-		EFB2_02421	0.19	+1.6
2,562,553	-		EFB2_02421	0.19	+2.1
2,562,553	-		EFB2_02421	0.19	+1.3
2,562,553	-		EFB2_02421	0.19	+1.2
2,562,553	-		EFB2_02421	0.19	+0.2
2,562,553	-		EFB2_02421	0.19	-0.3
2,562,554	+		EFB2_02421	0.19	+1.5
2,562,554	+		EFB2_02421	0.19	-0.5
2,562,554	+		EFB2_02421	0.19	-0.6
2,562,554	+		EFB2_02421	0.19	-2.5
2,562,555	-		EFB2_02421	0.19	-0.7
2,562,555	-		EFB2_02421	0.19	+0.7
2,562,555	-		EFB2_02421	0.19	+2.3
2,562,555	-		EFB2_02421	0.19	+1.1
2,562,555	-		EFB2_02421	0.19	-1.5
2,562,555	-		EFB2_02421	0.19	-0.5
2,562,569	+		EFB2_02421	0.21	-2.1
2,562,569	+		EFB2_02421	0.21	-0.5
2,562,570	-		EFB2_02421	0.21	-0.8
2,562,570	-		EFB2_02421	0.21	-0.3
2,562,588	+		EFB2_02421	0.22	+1.9
2,562,588	+		EFB2_02421	0.22	+1.2
2,562,588	+		EFB2_02421	0.22	+0.7
2,562,589	-		EFB2_02421	0.22	+0.5
2,562,589	-		EFB2_02421	0.22	+0.6
2,562,592	+		EFB2_02421	0.22	-1.1
2,562,606	+		EFB2_02421	0.24	+0.6
2,562,606	+		EFB2_02421	0.24	+0.2
2,562,607	-		EFB2_02421	0.24	+0.5
2,562,607	-		EFB2_02421	0.24	+0.6
2,562,607	-		EFB2_02421	0.24	+0.6
2,562,616	+		EFB2_02421	0.24	+1.7
2,562,616	+		EFB2_02421	0.24	+1.6
2,562,616	+		EFB2_02421	0.24	-1.0
2,562,616	+		EFB2_02421	0.24	+0.3
2,562,617	-		EFB2_02421	0.25	-0.0
2,562,617	-		EFB2_02421	0.25	+0.1
2,562,617	-		EFB2_02421	0.25	+2.5
2,562,617	-		EFB2_02421	0.25	-1.4
2,562,728	+		EFB2_02421	0.34	+0.6
2,562,728	+		EFB2_02421	0.34	+1.1
2,562,729	-		EFB2_02421	0.34	-2.8
2,562,738	+		EFB2_02421	0.35	-2.7
2,562,738	+		EFB2_02421	0.35	+0.2
2,562,739	-		EFB2_02421	0.35	-0.8
2,562,739	-		EFB2_02421	0.35	+0.6
2,562,739	-		EFB2_02421	0.35	-1.3
2,562,739	-		EFB2_02421	0.35	+2.6
2,562,739	-		EFB2_02421	0.35	-1.4
2,562,818	+		EFB2_02421	0.41	+1.0
2,562,818	+		EFB2_02421	0.41	-0.7
2,562,818	+		EFB2_02421	0.41	+1.5
2,562,818	+		EFB2_02421	0.41	-1.1
2,562,818	+		EFB2_02421	0.41	+2.3
2,562,818	+		EFB2_02421	0.41	-2.4
2,562,818	+		EFB2_02421	0.41	+2.0
2,562,818	+		EFB2_02421	0.41	+1.5
2,562,819	-		EFB2_02421	0.42	-0.8
2,562,819	-		EFB2_02421	0.42	-1.1
2,562,819	-		EFB2_02421	0.42	-1.9
2,562,880	-		EFB2_02421	0.47	-1.4