Strain Fitness in Escherichia fergusonii Becca around EFB2_00091

Experiment: BHIS_CaCl2 with hk phage cocktail 1 MOI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 with hk phage cocktail 1 MOI
82,524	+		EFB2_00089	0.78	+0.2
82,524	+		EFB2_00089	0.78	-0.5
82,524	+		EFB2_00089	0.78	+0.6
82,524	+		EFB2_00089	0.78	-0.6
82,524	+		EFB2_00089	0.78	+4.4
82,524	+		EFB2_00089	0.78	+1.3
82,524	+		EFB2_00089	0.78	-0.8
82,524	+		EFB2_00089	0.78	-2.2
82,524	+		EFB2_00089	0.78	+1.7
82,524	+		EFB2_00089	0.78	-0.8
82,524	+		EFB2_00089	0.78	-1.6
82,524	+		EFB2_00089	0.78	-0.7
82,524	+		EFB2_00089	0.78	+0.8
82,524	+		EFB2_00089	0.78	-0.5
82,524	+		EFB2_00089	0.78	-0.3
82,524	+		EFB2_00089	0.78	+0.6
82,525	-		EFB2_00089	0.79	+0.5
82,525	-		EFB2_00089	0.79	+0.2
82,525	-		EFB2_00089	0.79	+0.2
82,525	-		EFB2_00089	0.79	-0.7
82,525	-		EFB2_00089	0.79	+1.0
82,525	-		EFB2_00089	0.79	+0.1
82,525	-		EFB2_00089	0.79	+1.6
82,525	-		EFB2_00089	0.79	+0.1
82,525	-		EFB2_00089	0.79	-0.3
82,525	-		EFB2_00089	0.79	-0.2
82,525	-		EFB2_00089	0.79	+0.1
82,525	-		EFB2_00089	0.79	+0.2
82,525	-		EFB2_00089	0.79	-0.6
82,525	-		EFB2_00089	0.79	-1.3
82,525	-		EFB2_00089	0.79	-0.1
82,547	+		EFB2_00089	0.79	+2.0
82,553	+		EFB2_00089	0.80	-0.3
82,553	+		EFB2_00089	0.80	+0.2
82,553	+		EFB2_00089	0.80	+0.3
82,553	+		EFB2_00089	0.80	+0.8
82,553	+		EFB2_00089	0.80	+0.3
82,553	+		EFB2_00089	0.80	-0.8
82,553	+		EFB2_00089	0.80	-0.5
82,553	+		EFB2_00089	0.80	-2.1
82,553	+		EFB2_00089	0.80	-0.7
82,553	+		EFB2_00089	0.80	-2.4
82,553	+		EFB2_00089	0.80	+0.5
82,554	-		EFB2_00089	0.80	+1.2
82,554	-		EFB2_00089	0.80	-0.2
82,554	-		EFB2_00089	0.80	+1.2
82,554	-		EFB2_00089	0.80	-2.6
82,554	-		EFB2_00089	0.80	+2.7
82,554	-		EFB2_00089	0.80	-0.3
82,554	-		EFB2_00089	0.80	-0.6
82,554	-		EFB2_00089	0.80	-2.8
82,554	-		EFB2_00089	0.80	-0.8
82,554	-		EFB2_00089	0.80	-1.0
82,554	-		EFB2_00089	0.80	+1.7
82,554	-		EFB2_00089	0.80	+0.3
82,554	-		EFB2_00089	0.80	-0.3
82,554	-		EFB2_00089	0.80	+0.4
82,554	-		EFB2_00089	0.80	+0.3
82,554	-		EFB2_00089	0.80	+0.3
82,554	-		EFB2_00089	0.80	-2.8
82,559	+		EFB2_00089	0.80	+0.7
82,559	+		EFB2_00089	0.80	-2.3
82,559	+		EFB2_00089	0.80	-1.5
82,559	+		EFB2_00089	0.80	+1.4
82,559	+		EFB2_00089	0.80	+0.2
82,574	+		EFB2_00089	0.80	-0.0
82,574	+		EFB2_00089	0.80	-0.9
82,574	+		EFB2_00089	0.80	+0.9
82,575	-		EFB2_00089	0.81	+0.5
82,575	-		EFB2_00089	0.81	+0.1
82,575	-		EFB2_00089	0.81	+0.8
82,575	-		EFB2_00089	0.81	+0.9
82,575	-		EFB2_00089	0.81	+0.0
82,579	+		EFB2_00089	0.81	-0.2
82,579	+		EFB2_00089	0.81	-0.6
82,579	+		EFB2_00089	0.81	+1.4
82,579	+		EFB2_00089	0.81	+1.0
82,579	+		EFB2_00089	0.81	+2.4
82,579	+		EFB2_00089	0.81	+1.2
82,579	+		EFB2_00089	0.81	-1.0
82,579	+		EFB2_00089	0.81	+0.4
82,579	+		EFB2_00089	0.81	-0.5
82,580	-		EFB2_00089	0.81	-0.4
82,580	-		EFB2_00089	0.81	-1.9
82,580	-		EFB2_00089	0.81	+1.7
82,580	-		EFB2_00089	0.81	-0.4
82,580	-		EFB2_00089	0.81	-0.6
82,598	+		EFB2_00089	0.81	-2.3
82,598	+		EFB2_00089	0.81	+0.0
82,598	+		EFB2_00089	0.81	+0.8
82,598	+		EFB2_00089	0.81	+0.7
82,598	+		EFB2_00089	0.81	-1.0
82,599	-		EFB2_00089	0.81	-0.0
82,599	-		EFB2_00089	0.81	-0.7
82,599	-		EFB2_00089	0.81	+1.2
82,599	-		EFB2_00089	0.81	+0.2
82,599	-		EFB2_00089	0.81	-0.9
82,599	-		EFB2_00089	0.81	+0.7
82,599	-		EFB2_00089	0.81	-0.6
82,599	-		EFB2_00089	0.81	+0.2
82,599	-		EFB2_00089	0.81	-0.3
82,599	-		EFB2_00089	0.81	-1.1
82,606	+		EFB2_00089	0.82	-0.4
82,606	+		EFB2_00089	0.82	+0.3
82,606	+		EFB2_00089	0.82	-0.1
82,606	+		EFB2_00089	0.82	-0.8
82,607	-		EFB2_00089	0.82	+0.1
82,607	-		EFB2_00089	0.82	-0.8
82,607	-		EFB2_00089	0.82	+1.1
82,613	+		EFB2_00089	0.82	-1.1
82,613	+		EFB2_00089	0.82	-0.7
82,613	+		EFB2_00089	0.82	-0.2
82,613	+		EFB2_00089	0.82	+0.7
82,614	-		EFB2_00089	0.82	-0.9
82,614	-		EFB2_00089	0.82	-0.8
82,614	-		EFB2_00089	0.82	+0.5
82,651	+		EFB2_00089	0.84	-0.1
82,651	+		EFB2_00089	0.84	-0.8
82,651	+		EFB2_00089	0.84	+0.3
82,652	-		EFB2_00089	0.84	-0.3
82,652	-		EFB2_00089	0.84	+0.2
82,655	+		EFB2_00089	0.84	-0.0
82,655	+		EFB2_00089	0.84	-0.6
82,656	-		EFB2_00089	0.84	-1.0
82,656	-		EFB2_00089	0.84	+1.0
82,656	-		EFB2_00089	0.84	-0.9
82,656	-		EFB2_00089	0.84	+0.7
82,656	-		EFB2_00089	0.84	+0.2
82,656	-		EFB2_00089	0.84	-0.3
82,656	-		EFB2_00089	0.84	-2.0
82,671	+		EFB2_00089	0.84	+1.2
82,671	+		EFB2_00089	0.84	+0.1
82,672	-		EFB2_00089	0.84	+0.8
82,672	-		EFB2_00089	0.84	+0.1
82,672	-		EFB2_00089	0.84	+0.2
82,673	+		EFB2_00089	0.84	+0.5
82,674	-		EFB2_00089	0.84	-0.7
82,685	+		EFB2_00089	0.85	-0.2
82,685	+		EFB2_00089	0.85	-0.1
82,685	+		EFB2_00089	0.85	+0.1
82,688	+		EFB2_00089	0.85	+1.8
82,688	+		EFB2_00089	0.85	+0.7
82,689	-		EFB2_00089	0.85	+0.7
82,689	-		EFB2_00089	0.85	+0.3
82,689	-		EFB2_00089	0.85	-0.3
82,693	+		EFB2_00089	0.85	+0.3
82,693	+		EFB2_00089	0.85	+0.2
82,693	+		EFB2_00089	0.85	+0.1
82,693	+		EFB2_00089	0.85	+1.1
82,693	+		EFB2_00089	0.85	-0.8
82,694	-		EFB2_00089	0.85	-0.0
82,712	+		EFB2_00089	0.86	+0.8
82,712	+		EFB2_00089	0.86	-2.3
82,712	+		EFB2_00089	0.86	+0.4
82,713	-		EFB2_00089	0.86	-0.1
82,739	+		EFB2_00089	0.87	+0.6
82,739	+		EFB2_00089	0.87	-0.6
82,739	+		EFB2_00089	0.87	-0.1
82,739	+		EFB2_00089	0.87	-0.3
82,739	+		EFB2_00089	0.87	+0.9
82,739	+		EFB2_00089	0.87	-0.9
82,739	+		EFB2_00089	0.87	-1.5
82,739	+		EFB2_00089	0.87	+0.5
82,739	+		EFB2_00089	0.87	-0.2
82,740	-		EFB2_00089	0.87	-1.6
82,740	-		EFB2_00089	0.87	-0.9
82,740	-		EFB2_00089	0.87	-0.9
82,740	-		EFB2_00089	0.87	-0.5
82,757	+		EFB2_00089	0.88	+0.3
82,757	+		EFB2_00089	0.88	+4.0
82,757	+		EFB2_00089	0.88	-1.2
82,758	-		EFB2_00089	0.88	+0.5
82,782	+		EFB2_00089	0.89	+0.7
82,782	+		EFB2_00089	0.89	+1.1
82,783	-		EFB2_00089	0.89	+0.3
82,783	-		EFB2_00089	0.89	+1.1
82,783	-		EFB2_00089	0.89	-2.8
82,783	-		EFB2_00089	0.89	+0.9
82,783	-		EFB2_00089	0.89	-1.4
82,784	+		EFB2_00089	0.89	-0.1
82,784	+		EFB2_00089	0.89	+0.5
82,784	+		EFB2_00089	0.89	-0.9
82,784	+		EFB2_00089	0.89	+0.4
82,784	+		EFB2_00089	0.89	-0.1
82,784	+		EFB2_00089	0.89	-0.7
82,785	-		EFB2_00089	0.89	+0.6
82,835	+				+0.1
82,835	+				-1.0
82,835	+				+1.3
82,836	-				-1.1
82,853	+				-0.6
82,854	-				-2.2
82,862	+				+1.5
82,863	-				+0.1
82,901	+				-0.4
82,901	+				+1.0
82,901	+				+0.4
82,901	+				-1.4
82,901	+				+0.2
82,901	+				-1.3
82,901	+				-0.8
82,901	+				+0.6
82,901	+				-1.1
82,902	-				+0.9
82,902	-				+1.3
82,902	-				+0.4
82,902	-				-0.0
82,902	-				-1.3
82,902	-				+1.2
82,902	-				+0.6
82,902	-				+0.5
82,902	-				+0.4
82,906	+				+0.2
82,906	+				-0.3
82,906	+				+0.2
82,906	+				+0.1
82,906	+				+0.4
82,906	+				-1.4
82,906	+				-1.4
82,906	+				-0.7
82,907	-				-1.6
82,907	-				+0.8
82,907	-				+0.0
82,907	-				+1.6
82,907	-				-1.7
82,907	-				+0.5
82,926	+				+0.4
82,926	+				-0.9
82,926	+				-0.4
82,926	+				+0.7
82,926	+				+0.7
82,926	+				+0.1
82,926	+				-0.3
82,926	+				-0.6
82,926	+				+0.1
82,926	+				-0.7
82,926	+				-0.3
82,926	+				+0.6
82,926	+				+1.3
82,926	+				+0.2
82,926	+				+1.1
82,926	+				+0.7
82,926	+				-1.1
82,926	+				-1.1
82,926	+				+0.8
82,926	+				-2.5
82,926	+				-2.5
82,926	+				-0.7
82,926	+				-2.1
82,926	+				+1.2
82,926	+				-0.3
82,927	-				-0.5
82,927	-				-3.8
82,927	-				+0.4
82,927	-				+1.3
82,927	-				-1.7
82,927	-				-0.8
82,927	-				-1.0
82,927	-				-0.6
82,927	-				-0.3
82,927	-				-1.9
82,927	-				-0.4
82,927	-				-1.2
82,927	-				-0.1
82,927	-				-2.8
82,927	-				-1.2
82,927	-				+0.2
82,927	-				-0.9
82,927	-				-0.2
82,927	-				-0.2
82,927	-				+0.7
82,927	-				-0.6
82,927	-				+0.5
82,927	-				-2.2
82,927	-				-0.1
82,927	-				-0.0
82,927	-				-1.6
82,927	-				-0.9
82,927	-				-2.4
82,927	-				-0.6
82,927	-				+0.5
82,927	-				-0.4
82,928	+				-0.1
82,929	-				+0.9
82,929	-				-1.4
82,937	+				+1.0
82,940	-				+0.3
82,979	+				+2.4
82,979	+				+0.6
82,980	-				-0.4
82,988	+				+0.7
82,988	+				-1.3
82,988	+				-1.2
82,988	+				+0.5
82,989	-				+0.5
82,993	+				+0.3
82,993	+				+0.7
82,993	+				-1.6
82,993	+				+1.9
82,993	+				-1.1
82,993	+				-0.4
82,994	-				-0.2
82,994	-				+0.1
82,994	-				-0.2
82,994	-				-0.3
83,004	-				+0.2
83,004	-				-0.2
83,005	+				-1.5
83,015	+				-1.3
83,016	-				+0.8
83,050	+				-0.2
83,050	+				+0.6
83,050	+				-0.9
83,051	-				-1.4
83,051	-				+1.1
83,051	-				+0.4
83,059	+				+0.4
83,059	+				+0.9
83,059	+				+0.3
83,060	-				-0.8
83,060	-				+2.6
83,060	-				+0.3
83,067	+				-0.2
83,068	-				+0.4
83,068	-				+0.6
83,068	-				-0.4
83,080	+				-3.0
83,081	-				-2.3
83,088	+				+0.0
83,122	+		EFB2_00090	0.16	+0.4
83,122	+		EFB2_00090	0.16	+0.5
83,122	+		EFB2_00090	0.16	-0.4
83,122	+		EFB2_00090	0.16	+0.1
83,122	+		EFB2_00090	0.16	+0.6
83,122	+		EFB2_00090	0.16	+0.1
83,122	+		EFB2_00090	0.16	+1.4
83,123	-		EFB2_00090	0.16	-2.0
83,123	-		EFB2_00090	0.16	-0.0
83,123	-		EFB2_00090	0.16	+2.1
83,123	-		EFB2_00090	0.16	+1.7
83,123	-		EFB2_00090	0.16	+0.2
83,123	-		EFB2_00090	0.16	+0.6
83,124	+		EFB2_00090	0.16	-0.6
83,124	+		EFB2_00090	0.16	+1.0
83,124	+		EFB2_00090	0.16	-2.6
83,124	+		EFB2_00090	0.16	-1.2
83,124	+		EFB2_00090	0.16	+0.6
83,125	-		EFB2_00090	0.16	-0.6
83,125	-		EFB2_00090	0.16	+0.3
83,125	-		EFB2_00090	0.16	-1.9
83,125	-		EFB2_00090	0.16	-1.7
83,125	-		EFB2_00090	0.16	-0.1
83,125	-		EFB2_00090	0.16	+0.7
83,127	+		EFB2_00090	0.17	-0.8
83,127	+		EFB2_00090	0.17	-0.0
83,127	+		EFB2_00090	0.17	+0.8
83,127	+		EFB2_00090	0.17	-0.5
83,127	+		EFB2_00090	0.17	-0.2
83,127	+		EFB2_00090	0.17	+0.6
83,127	+		EFB2_00090	0.17	+0.8
83,127	+		EFB2_00090	0.17	+0.5
83,127	+		EFB2_00090	0.17	-1.3
83,127	+		EFB2_00090	0.17	-2.3
83,128	-		EFB2_00090	0.17	+0.4
83,128	-		EFB2_00090	0.17	+0.6
83,128	-		EFB2_00090	0.17	+0.6
83,128	-		EFB2_00090	0.17	-0.4
83,128	-		EFB2_00090	0.17	+0.9
83,129	+		EFB2_00090	0.17	+0.5
83,129	+		EFB2_00090	0.17	+0.3
83,129	+		EFB2_00090	0.17	-0.1
83,147	-		EFB2_00090	0.21	+0.1
83,147	-		EFB2_00090	0.21	+0.7
83,166	+		EFB2_00090	0.25	+1.2
83,166	+		EFB2_00090	0.25	+0.8
83,199	+		EFB2_00090	0.33	-1.9
83,200	-		EFB2_00090	0.33	+0.0
83,200	-		EFB2_00090	0.33	+0.8
83,200	-		EFB2_00090	0.33	-2.0
83,200	-		EFB2_00090	0.33	+0.5
83,206	+		EFB2_00090	0.34	-0.4
83,206	+		EFB2_00090	0.34	+0.2
83,207	-		EFB2_00090	0.34	+1.8
83,207	-		EFB2_00090	0.34	+0.1
83,209	+		EFB2_00090	0.35	+0.3
83,209	+		EFB2_00090	0.35	+0.2
83,209	+		EFB2_00090	0.35	+0.4
83,209	+		EFB2_00090	0.35	+1.2
83,210	-		EFB2_00090	0.35	+0.5
83,261	+		EFB2_00090	0.46	+0.5
83,263	+		EFB2_00090	0.47	-0.8
83,270	+		EFB2_00090	0.48	+0.2
83,271	-		EFB2_00090	0.49	-0.6
83,272	+		EFB2_00090	0.49	+0.9
83,272	+		EFB2_00090	0.49	-0.4
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84,756	+		EFB2_00092	0.55	-2.1
84,757	-		EFB2_00092	0.55	-0.4
84,783	+		EFB2_00092	0.57	+1.1
84,783	+		EFB2_00092	0.57	+1.3
84,784	-		EFB2_00092	0.57	+0.8
84,784	-		EFB2_00092	0.57	+1.1
84,784	-		EFB2_00092	0.57	+1.1
84,784	-		EFB2_00092	0.57	+0.2
84,838	-		EFB2_00092	0.61	-0.9
84,871	+		EFB2_00092	0.64	-0.4
84,871	+		EFB2_00092	0.64	-0.1
84,871	+		EFB2_00092	0.64	-1.7
84,872	-		EFB2_00092	0.64	+1.0
84,872	-		EFB2_00092	0.64	-1.1
84,872	-		EFB2_00092	0.64	-0.6
84,872	-		EFB2_00092	0.64	-0.4
84,873	+		EFB2_00092	0.64	-1.3
84,873	+		EFB2_00092	0.64	-0.1
84,873	+		EFB2_00092	0.64	-0.1
84,874	-		EFB2_00092	0.64	-0.1
84,958	-		EFB2_00092	0.71	-0.1
85,003	+		EFB2_00092	0.74	+1.0
85,004	-		EFB2_00092	0.74	+0.5
85,005	+		EFB2_00092	0.75	-1.4
85,006	-		EFB2_00092	0.75	+0.3
85,013	+		EFB2_00092	0.75	-3.0