Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02612

Experiment: Pectic galactan from potato 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02611 and BACOVA_02612 are separated by 472 nucleotidesBACOVA_02612 and BACOVA_02613 are separated by 76 nucleotidesBACOVA_02613 and BACOVA_02614 overlap by 13 nucleotides BACOVA_02611: BACOVA_02611 - hypothetical protein, at 381,342 to 381,461 _02611 BACOVA_02612: BACOVA_02612 - DNA-binding helix-turn-helix protein, at 381,934 to 382,404 _02612 BACOVA_02613: BACOVA_02613 - oxidoreductase NAD-binding domain protein, at 382,481 to 383,257 _02613 BACOVA_02614: BACOVA_02614 - dihydroorotate dehydrogenase 1B, at 383,245 to 384,156 _02614 Position (kb) 381 382 383Strain fitness (log2 ratio) -2 -1 0 1at 381.137 kb on - strandat 381.140 kb on - strandat 381.256 kb on - strandat 381.435 kb on - strand, within BACOVA_02611at 381.439 kb on - strand, within BACOVA_02611at 381.930 kb on + strandat 382.478 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pectic galactan from potato 2.5 mg/mL (C)
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381,137 - -0.3
381,140 - -0.5
381,256 - -1.1
381,435 - BACOVA_02611 0.78 +0.5
381,439 - BACOVA_02611 0.81 -2.0
381,930 + -0.3
382,478 + -1.2

Or see this region's nucleotide sequence