Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00189

Experiment: Pectic galactan from potato 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato 2.5 mg/mL (C)
3,079	+		BACOVA_00187	0.88	-1.4
3,106	+		BACOVA_00187	0.90	-0.3
3,107	-		BACOVA_00187	0.90	-1.3
3,107	-		BACOVA_00187	0.90	+0.1
3,139	-				+1.2
3,139	-				-0.1
3,203	-				-0.0
3,254	-				-2.3
3,254	-				-0.8
3,262	+				-0.6
3,262	+				-0.6
3,262	+				-0.8
3,263	-				+0.0
3,344	-				+1.1
3,351	+				+1.3
3,391	+				-0.5
3,391	+				-0.7
3,391	+				+0.6
3,396	+				-1.2
3,397	-				+0.3
3,397	-				+0.6
3,399	+				-1.2
3,400	-				+0.1
3,424	+				+2.9
3,425	-				-0.0
3,455	-				-1.9
3,477	+		BACOVA_00188	0.11	+1.3
3,511	+		BACOVA_00188	0.16	-0.3
3,512	-		BACOVA_00188	0.17	-1.0
3,554	+		BACOVA_00188	0.23	+1.4
3,578	+		BACOVA_00188	0.27	-0.1
3,578	+		BACOVA_00188	0.27	+0.2
3,590	+		BACOVA_00188	0.29	+0.4
3,591	-		BACOVA_00188	0.29	-0.0
3,591	-		BACOVA_00188	0.29	+0.1
3,591	-		BACOVA_00188	0.29	+0.6
3,591	-		BACOVA_00188	0.29	+1.7
3,591	-		BACOVA_00188	0.29	+0.1
3,594	-		BACOVA_00188	0.29	+2.0
3,606	-		BACOVA_00188	0.31	-1.5
3,606	-		BACOVA_00188	0.31	-1.5
3,618	+		BACOVA_00188	0.33	+0.5
3,619	-		BACOVA_00188	0.33	-1.4
3,639	+		BACOVA_00188	0.36	+0.2
3,640	-		BACOVA_00188	0.36	+0.6
3,640	-		BACOVA_00188	0.36	+0.6
3,640	-		BACOVA_00188	0.36	+1.2
3,641	+		BACOVA_00188	0.36	+2.4
3,641	+		BACOVA_00188	0.36	+1.7
3,642	-		BACOVA_00188	0.37	-0.9
3,656	+		BACOVA_00188	0.39	+0.4
3,677	+		BACOVA_00188	0.42	+0.6
3,709	-		BACOVA_00188	0.47	-0.4
3,711	+		BACOVA_00188	0.47	+1.7
3,712	-		BACOVA_00188	0.47	+1.4
3,713	+		BACOVA_00188	0.48	-1.2
3,713	+		BACOVA_00188	0.48	-0.0
3,828	+		BACOVA_00188	0.65	+1.1
3,832	-		BACOVA_00188	0.66	+0.8
3,849	-		BACOVA_00188	0.69	-1.2
3,849	-		BACOVA_00188	0.69	-1.1
3,863	+		BACOVA_00188	0.71	-0.8
3,878	-		BACOVA_00188	0.73	+1.0
3,946	-		BACOVA_00188	0.83	+0.4
3,971	+		BACOVA_00188	0.87	-1.8
3,995	+				+0.8
3,996	-				+0.4
3,996	-				-0.0
4,052	+				-0.3
4,053	-				+1.5
4,058	+				-0.0
4,116	+				+0.8
4,159	+				-1.8
4,162	+				+0.1
4,220	-		BACOVA_00189	0.12	+0.6
4,234	-		BACOVA_00189	0.13	+0.1
4,300	+		BACOVA_00189	0.18	+1.0
4,360	+		BACOVA_00189	0.22	+0.7
4,367	-		BACOVA_00189	0.23	+0.6
4,367	-		BACOVA_00189	0.23	-1.0
4,370	+		BACOVA_00189	0.23	+1.6
4,407	+		BACOVA_00189	0.26	+0.0
4,407	+		BACOVA_00189	0.26	-0.8
4,425	+		BACOVA_00189	0.27	+0.7
4,426	-		BACOVA_00189	0.27	+0.8
4,470	+		BACOVA_00189	0.30	+0.2
4,483	+		BACOVA_00189	0.31	+0.8
4,540	-		BACOVA_00189	0.35	-1.0
4,569	+		BACOVA_00189	0.37	+1.0
4,675	-		BACOVA_00189	0.45	-0.2
4,695	+		BACOVA_00189	0.47	+1.0
4,696	-		BACOVA_00189	0.47	-0.4
4,699	-		BACOVA_00189	0.47	+1.5
4,699	-		BACOVA_00189	0.47	-0.2
4,736	-		BACOVA_00189	0.50	-0.1
4,764	+		BACOVA_00189	0.52	+0.4
4,765	-		BACOVA_00189	0.52	+0.3
4,770	+		BACOVA_00189	0.52	-0.8
4,780	+		BACOVA_00189	0.53	+0.4
4,832	-		BACOVA_00189	0.57	+0.5
4,863	+		BACOVA_00189	0.59	-0.5
4,864	-		BACOVA_00189	0.59	+0.7
4,864	-		BACOVA_00189	0.59	+0.2
4,864	-		BACOVA_00189	0.59	+0.9
4,888	+		BACOVA_00189	0.61	-0.8
4,983	+		BACOVA_00189	0.68	+1.0
4,993	-		BACOVA_00189	0.68	-0.4
5,073	+		BACOVA_00189	0.74	+1.4
5,074	-		BACOVA_00189	0.74	+2.2
5,074	-		BACOVA_00189	0.74	+0.7
5,074	-		BACOVA_00189	0.74	+0.2
5,077	+		BACOVA_00189	0.74	+0.7
5,078	-		BACOVA_00189	0.74	+0.2
5,079	+		BACOVA_00189	0.75	+0.1
5,095	+		BACOVA_00189	0.76	+0.7
5,104	-		BACOVA_00189	0.76	-0.4
5,140	+		BACOVA_00189	0.79	-0.4
5,152	-		BACOVA_00189	0.80	-1.0
5,160	+		BACOVA_00189	0.80	+1.1
5,178	+		BACOVA_00189	0.82	-0.1
5,193	-		BACOVA_00189	0.83	+0.6
5,240	-		BACOVA_00189	0.86	-0.4
5,271	+		BACOVA_00189	0.89	+1.8
5,274	+		BACOVA_00189	0.89	+0.3
5,278	+		BACOVA_00189	0.89	-1.0
5,281	+		BACOVA_00189	0.89	+1.1
5,283	+		BACOVA_00189	0.89	+0.2
5,283	+		BACOVA_00189	0.89	+2.5
5,284	-		BACOVA_00189	0.89	-0.0
5,286	-		BACOVA_00189	0.90	-0.1
5,318	+				+0.8
5,318	+				+1.3
5,322	+				-1.1
5,323	-				+0.5
5,355	+				+0.7
5,356	-				-0.8
5,356	-				+0.2
5,356	-				+0.4
5,358	+				-0.7
5,359	-				+0.7
5,416	-				-1.9
5,416	-				-1.2
5,433	+				+0.9
5,450	+				-1.1
5,525	-		BACOVA_00190	0.16	+1.6
5,619	-		BACOVA_00190	0.29	+0.0
5,723	+		BACOVA_00190	0.44	-0.4
5,739	-		BACOVA_00190	0.46	-0.8
5,762	+		BACOVA_00190	0.50	+0.5
5,819	-		BACOVA_00190	0.58	-2.4
5,822	+		BACOVA_00190	0.58	+1.3
5,822	+		BACOVA_00190	0.58	-0.6
5,874	-		BACOVA_00190	0.66	+0.7
5,884	+		BACOVA_00190	0.67	+0.2
5,885	-		BACOVA_00190	0.67	+0.4
5,885	-		BACOVA_00190	0.67	-1.1
5,896	+		BACOVA_00190	0.69	-0.0
5,982	+		BACOVA_00190	0.81	+0.1
6,025	-		BACOVA_00190	0.87	+0.4
6,026	+		BACOVA_00190	0.88	+0.6
6,026	+		BACOVA_00190	0.88	+0.4
6,026	+		BACOVA_00190	0.88	+0.2
6,027	-		BACOVA_00190	0.88	-2.5
6,027	-		BACOVA_00190	0.88	+0.4
6,048	+				-1.0
6,048	+				-2.0
6,082	+				+0.1
6,098	+				-0.5
6,098	+				+0.6
6,141	+				+1.1
6,141	+				+1.0
6,142	-		BACOVA_00191	0.10	+0.6
6,147	+		BACOVA_00191	0.12	+0.2
6,179	-		BACOVA_00191	0.23	-0.6
6,180	+		BACOVA_00191	0.23	+0.7
6,180	+		BACOVA_00191	0.23	-0.1
6,180	+		BACOVA_00191	0.23	-0.1
6,261	+		BACOVA_00191	0.51	-1.5
6,265	+		BACOVA_00191	0.52	-0.3
6,288	+		BACOVA_00191	0.60	+2.9
6,297	+		BACOVA_00191	0.63	-0.8
6,312	+		BACOVA_00191	0.68	+0.4
6,313	-		BACOVA_00191	0.68	+1.6
6,377	-				+1.0
6,377	-				+0.6
6,384	-				-0.5
6,419	+				+0.7
6,421	+				-1.4
6,424	+				-0.2
6,425	-				+0.3