Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5610

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
2,628,172	+		GFF5609	0.43	+0.8
2,628,172	+		GFF5609	0.43	-0.5
2,628,173	-		GFF5609	0.43	-0.8
2,628,187	+		GFF5609	0.44	+0.3
2,628,187	+		GFF5609	0.44	+0.5
2,628,188	-		GFF5609	0.44	-0.1
2,628,188	-		GFF5609	0.44	+0.7
2,628,385	+		GFF5609	0.64	-0.2
2,629,029	-		GFF5610	0.33	-0.2
2,629,082	+		GFF5610	0.40	-1.3
2,629,083	-		GFF5610	0.40	-0.5
2,629,118	+		GFF5610	0.45	+0.2
2,629,292	+		GFF5610	0.67	+1.2
2,629,382	+		GFF5610	0.78	-0.2
2,629,382	+		GFF5610	0.78	+0.3
2,630,007	+		GFF5611	0.45	-0.0
2,630,007	+		GFF5611	0.45	+0.6
2,630,008	-		GFF5611	0.45	+0.2
2,630,552	+				-0.0