Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5288

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
2,300,972	+		GFF5287	0.80	-0.5
2,300,972	+		GFF5287	0.80	-0.1
2,300,973	-		GFF5287	0.80	-1.4
2,300,973	-		GFF5287	0.80	-0.3
2,300,973	-		GFF5287	0.80	-0.4
2,301,092	+		GFF5287	0.85	+0.4
2,301,407	+				+0.2
2,301,453	-				-1.0
2,301,780	+		GFF5288	0.24	+0.5
2,302,122	-		GFF5288	0.49	-1.6
2,302,551	-		GFF5288	0.81	-0.2
2,302,551	-		GFF5288	0.81	-0.2
2,302,943	-				-0.3
2,303,579	-				+0.1