Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5077

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
2,091,817	-				+0.4
2,091,817	-				+0.5
2,092,083	+		GFF5076	0.38	+1.5
2,092,083	+		GFF5076	0.38	+0.3
2,092,083	+		GFF5076	0.38	+0.3
2,092,727	-		GFF5077	0.10	+0.2
2,092,976	-		GFF5077	0.33	-0.5
2,092,976	-		GFF5077	0.33	+0.4
2,093,002	+		GFF5077	0.36	+0.4
2,093,002	+		GFF5077	0.36	+2.0
2,093,003	-		GFF5077	0.36	-0.5
2,093,234	-		GFF5077	0.57	+0.1
2,093,801	+				+0.1
2,093,829	-				+0.6
2,094,694	+				-0.3
2,094,695	-				+0.8
2,094,695	-				+1.0
2,094,695	-				+1.1