Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1642
Experiment: Ying_AminoAcid20 rep C; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_AminoAcid20 rep C; time point 1 |
---|---|---|---|---|---|
remove | |||||
496,670 | - | GFF1641 | 0.39 | +0.3 | |
497,137 | + | +1.0 | |||
497,622 | - | GFF1642 | 0.57 | +0.3 | |
498,511 | - | GFF1643 | 0.39 | +0.1 | |
498,541 | - | GFF1643 | 0.41 | +0.3 | |
498,565 | - | GFF1643 | 0.43 | -0.8 | |
498,658 | - | GFF1643 | 0.50 | +0.4 | |
498,744 | + | GFF1643 | 0.56 | -0.4 | |
498,745 | - | GFF1643 | 0.56 | -0.1 | |
498,900 | + | GFF1643 | 0.67 | -0.1 |
Or see this region's nucleotide sequence