Experiment: Ying_AminoAcid20 rep C; time point 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1571 and GFF1572 are separated by 27 nucleotides GFF1572 and GFF1573 are separated by 28 nucleotides
GFF1571 - Hypothetical Nudix-like regulator, at 426,073 to 427,095
GFF1571
GFF1572 - NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase, at 427,123 to 428,838
GFF1572
GFF1573 - Nicotinate phosphoribosyltransferase (EC 2.4.2.11), at 428,867 to 430,054
GFF1573
Position (kb) 427
428
429 Strain fitness (log2 ratio) -1
0
1 at 426.492 kb on - strand, within GFF1571 at 426.492 kb on - strand, within GFF1571 at 426.588 kb on - strand, within GFF1571 at 426.659 kb on + strand, within GFF1571 at 426.660 kb on - strand, within GFF1571 at 426.848 kb on + strand, within GFF1571 at 427.377 kb on - strand, within GFF1572 at 427.514 kb on + strand, within GFF1572 at 427.515 kb on - strand, within GFF1572 at 428.349 kb on - strand, within GFF1572 at 428.349 kb on - strand, within GFF1572 at 428.477 kb on + strand, within GFF1572 at 428.477 kb on + strand, within GFF1572 at 428.478 kb on - strand, within GFF1572 at 428.478 kb on - strand, within GFF1572 at 428.478 kb on - strand, within GFF1572 at 428.546 kb on + strand, within GFF1572 at 428.546 kb on + strand, within GFF1572 at 428.696 kb on + strand at 428.696 kb on + strand at 428.697 kb on - strand at 428.697 kb on - strand at 429.079 kb on - strand, within GFF1573 at 429.079 kb on - strand, within GFF1573 at 429.237 kb on + strand, within GFF1573 at 429.237 kb on + strand, within GFF1573 at 429.237 kb on + strand, within GFF1573 at 429.246 kb on - strand, within GFF1573 at 429.310 kb on - strand, within GFF1573 at 429.388 kb on - strand, within GFF1573 at 429.423 kb on + strand, within GFF1573 at 429.658 kb on - strand, within GFF1573 at 429.766 kb on - strand, within GFF1573 at 429.766 kb on - strand, within GFF1573 at 429.819 kb on + strand, within GFF1573 at 429.819 kb on + strand, within GFF1573 at 429.837 kb on + strand, within GFF1573 at 429.837 kb on + strand, within GFF1573 at 429.838 kb on - strand, within GFF1573
Per-strain Table
Position Strand Gene LocusTag Fraction Ying_AminoAcid20 rep C; time point 1 remove 426,492 - GFF1571 0.41 +0.7 426,492 - GFF1571 0.41 -0.9 426,588 - GFF1571 0.50 +0.3 426,659 + GFF1571 0.57 -0.1 426,660 - GFF1571 0.57 +0.1 426,848 + GFF1571 0.76 +0.3 427,377 - GFF1572 0.15 +0.4 427,514 + GFF1572 0.23 +0.2 427,515 - GFF1572 0.23 -0.0 428,349 - GFF1572 0.71 +0.3 428,349 - GFF1572 0.71 +0.4 428,477 + GFF1572 0.79 +0.2 428,477 + GFF1572 0.79 +0.3 428,478 - GFF1572 0.79 +0.3 428,478 - GFF1572 0.79 +0.3 428,478 - GFF1572 0.79 +0.1 428,546 + GFF1572 0.83 +0.5 428,546 + GFF1572 0.83 -0.0 428,696 + -0.1 428,696 + -0.2 428,697 - -1.2 428,697 - -0.0 429,079 - GFF1573 0.18 -1.1 429,079 - GFF1573 0.18 +0.4 429,237 + GFF1573 0.31 -0.5 429,237 + GFF1573 0.31 -0.0 429,237 + GFF1573 0.31 -0.1 429,246 - GFF1573 0.32 -0.6 429,310 - GFF1573 0.37 +0.7 429,388 - GFF1573 0.44 -0.3 429,423 + GFF1573 0.47 -0.0 429,658 - GFF1573 0.67 +0.0 429,766 - GFF1573 0.76 +0.2 429,766 - GFF1573 0.76 +0.1 429,819 + GFF1573 0.80 -0.2 429,819 + GFF1573 0.80 -0.1 429,837 + GFF1573 0.82 -0.4 429,837 + GFF1573 0.82 +1.1 429,838 - GFF1573 0.82 -0.1
Or see this region's nucleotide sequence