Experiment: b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03000 and BACOVA_03001 are separated by 199 nucleotides BACOVA_03001 and BACOVA_03002 are separated by 223 nucleotides BACOVA_03002 and BACOVA_03003 are separated by 76 nucleotides BACOVA_03003 and BACOVA_03004 are separated by 5 nucleotides
BACOVA_02999: BACOVA_02999 - hypothetical protein, at 72,646 to 73,155
_02999
BACOVA_03000: BACOVA_03000 - hypothetical protein, at 73,085 to 73,192
_03000
BACOVA_03001: BACOVA_03001 - tRNA-Met, at 73,392 to 73,465
_03001
BACOVA_03002: BACOVA_03002 - hypothetical protein, at 73,689 to 74,075
_03002
BACOVA_03003: BACOVA_03003 - permease, YjgP/YjgQ family, at 74,152 to 76,050
_03003
BACOVA_03004: BACOVA_03004 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 76,056 to 77,273
_03004
Position (kb) 74
75
76
77 Strain fitness (log2 ratio) -2
-1
0
1 at 73.161 kb on + strand, within BACOVA_03000 at 73.161 kb on + strand, within BACOVA_03000 at 73.162 kb on - strand, within BACOVA_03000 at 73.162 kb on - strand, within BACOVA_03000 at 73.171 kb on + strand, within BACOVA_03000 at 73.191 kb on - strand at 73.287 kb on + strand at 73.293 kb on + strand at 73.294 kb on - strand at 73.297 kb on + strand at 73.309 kb on + strand at 73.314 kb on - strand at 73.314 kb on - strand at 73.572 kb on + strand at 73.573 kb on - strand at 73.614 kb on - strand at 73.636 kb on + strand at 73.637 kb on - strand at 73.757 kb on + strand, within BACOVA_03002 at 73.758 kb on - strand, within BACOVA_03002 at 73.758 kb on - strand, within BACOVA_03002 at 73.763 kb on + strand, within BACOVA_03002 at 73.763 kb on + strand, within BACOVA_03002 at 73.819 kb on + strand, within BACOVA_03002 at 73.823 kb on - strand, within BACOVA_03002 at 73.950 kb on + strand, within BACOVA_03002 at 73.951 kb on - strand, within BACOVA_03002 at 73.951 kb on - strand, within BACOVA_03002 at 73.951 kb on - strand, within BACOVA_03002 at 73.971 kb on + strand, within BACOVA_03002 at 73.972 kb on - strand, within BACOVA_03002 at 73.972 kb on - strand, within BACOVA_03002 at 73.972 kb on - strand, within BACOVA_03002 at 74.012 kb on - strand, within BACOVA_03002 at 76.048 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C) remove 73,161 + BACOVA_03000 0.70 +0.3 73,161 + BACOVA_03000 0.70 -1.0 73,162 - BACOVA_03000 0.71 -0.1 73,162 - BACOVA_03000 0.71 +0.2 73,171 + BACOVA_03000 0.80 -0.6 73,191 - +0.3 73,287 + +0.9 73,293 + +0.8 73,294 - -0.2 73,297 + +0.6 73,309 + -0.2 73,314 - +0.4 73,314 - -0.3 73,572 + +0.6 73,573 - -0.1 73,614 - +0.0 73,636 + +0.5 73,637 - -2.3 73,757 + BACOVA_03002 0.18 -0.8 73,758 - BACOVA_03002 0.18 -1.4 73,758 - BACOVA_03002 0.18 -2.4 73,763 + BACOVA_03002 0.19 -2.0 73,763 + BACOVA_03002 0.19 -0.6 73,819 + BACOVA_03002 0.34 -1.6 73,823 - BACOVA_03002 0.35 -1.7 73,950 + BACOVA_03002 0.67 -1.0 73,951 - BACOVA_03002 0.68 -2.4 73,951 - BACOVA_03002 0.68 -2.0 73,951 - BACOVA_03002 0.68 -1.4 73,971 + BACOVA_03002 0.73 -2.7 73,972 - BACOVA_03002 0.73 -2.7 73,972 - BACOVA_03002 0.73 -0.8 73,972 - BACOVA_03002 0.73 -1.0 74,012 - BACOVA_03002 0.83 -2.1 76,048 + +0.1
Or see this region's nucleotide sequence