Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5756

Experiment: Ying_AminoAcid20 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 1
2,781,085	+		GFF5755	0.48	-0.2
2,781,646	+				+0.1
2,781,646	+				-0.1
2,782,345	+		GFF5756	0.77	-2.7
2,782,346	-		GFF5756	0.77	-0.4
2,782,728	-				-0.4
2,782,832	+		GFF5757	0.19	-0.2
2,782,961	+		GFF5757	0.43	+0.9
2,782,961	+		GFF5757	0.43	-2.2
2,782,962	-		GFF5757	0.43	-0.2
2,783,078	+		GFF5757	0.64	+0.3
2,783,079	-		GFF5757	0.64	-0.3
2,783,079	-		GFF5757	0.64	-1.6
2,783,133	-		GFF5757	0.74	+2.0
2,783,133	-		GFF5757	0.74	-0.1
2,783,162	+		GFF5757	0.79	-0.2
2,783,177	+		GFF5757	0.82	-0.4
2,783,201	+		GFF5757	0.87	-0.4
2,783,380	+		GFF5758	0.11	-1.1