Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4651

Experiment: Ying_AminoAcid20 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 1
1,601,022	+		GFF4649	0.89	-0.0
1,601,022	+		GFF4649	0.89	+0.4
1,601,022	+		GFF4649	0.89	-0.2
1,601,022	+		GFF4649	0.89	-0.5
1,601,022	+		GFF4649	0.89	-1.1
1,601,022	+		GFF4649	0.89	+1.2
1,601,022	+		GFF4649	0.89	-1.5
1,601,023	-		GFF4649	0.89	-0.0
1,601,023	-		GFF4649	0.89	-0.5
1,601,023	-		GFF4649	0.89	+0.6
1,601,190	-				+0.4
1,601,344	+				+0.1
1,601,633	+		GFF4650	0.61	+1.3
1,601,634	-		GFF4650	0.62	+0.1
1,601,634	-		GFF4650	0.62	+0.3
1,601,638	+		GFF4650	0.63	+0.7
1,601,638	+		GFF4650	0.63	+0.2
1,601,638	+		GFF4650	0.63	+0.0
1,601,638	+		GFF4650	0.63	-0.2
1,601,638	+		GFF4650	0.63	-0.2
1,601,638	+		GFF4650	0.63	+0.5
1,601,638	+		GFF4650	0.63	+0.2
1,601,638	+		GFF4650	0.63	-0.4
1,601,638	+		GFF4650	0.63	+0.2
1,601,638	+		GFF4650	0.63	-0.1
1,601,638	+		GFF4650	0.63	+0.0
1,601,638	+		GFF4650	0.63	-0.2
1,601,639	-		GFF4650	0.63	-0.1
1,601,639	-		GFF4650	0.63	-0.1
1,601,639	-		GFF4650	0.63	+1.3
1,601,639	-		GFF4650	0.63	+0.1
1,601,639	-		GFF4650	0.63	+0.0
1,601,639	-		GFF4650	0.63	-0.1
1,601,639	-		GFF4650	0.63	+0.2
1,601,800	+				-0.1
1,601,801	-				+0.6
1,601,836	+				+0.9
1,601,837	-				-0.3
1,601,875	+				+0.1
1,601,875	+				+0.2
1,601,875	+				-0.4
1,601,879	+				+0.2
1,601,880	-				+0.3
1,601,880	-				-0.2
1,601,880	-				-0.2
1,601,880	-				+0.2
1,602,161	+		GFF4651	0.14	-0.1
1,602,161	+		GFF4651	0.14	+1.2
1,602,161	+		GFF4651	0.14	-0.1
1,602,162	-		GFF4651	0.15	+0.4
1,602,162	-		GFF4651	0.15	+1.1
1,602,162	-		GFF4651	0.15	-0.2
1,602,162	-		GFF4651	0.15	-1.3
1,602,221	+		GFF4651	0.18	-1.2
1,602,368	+		GFF4651	0.28	+0.0
1,602,368	+		GFF4651	0.28	+0.2
1,602,369	-		GFF4651	0.28	+0.3
1,602,482	+		GFF4651	0.35	-0.0
1,602,483	-		GFF4651	0.35	+0.2
1,603,145	+		GFF4651	0.78	+0.1
1,603,163	+		GFF4651	0.79	-0.3
1,603,163	+		GFF4651	0.79	-0.7
1,603,163	+		GFF4651	0.79	+0.7
1,603,442	+				+0.2
1,603,442	+				-0.4
1,603,538	-				-0.2
1,603,598	+				-1.0
1,603,598	+				-0.0
1,603,903	+		GFF4652	0.39	-0.5
1,604,107	+		GFF4652	0.63	-0.0
1,604,107	+		GFF4652	0.63	+0.2
1,604,108	-		GFF4652	0.64	+0.1
1,604,108	-		GFF4652	0.64	+0.2
1,604,212	+		GFF4652	0.76	+0.3
1,604,212	+		GFF4652	0.76	+0.1
1,604,212	+		GFF4652	0.76	+0.5
1,604,212	+		GFF4652	0.76	+0.8
1,604,213	-		GFF4652	0.76	-0.4
1,604,213	-		GFF4652	0.76	+0.5
1,604,422	-				+0.5
1,604,476	+				+0.0
1,604,476	+				+0.5