Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3198

Experiment: Ying_AminoAcid20 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 1
85,221	-				+0.3
85,233	-				+0.9
85,233	-				+0.6
85,302	-				-0.9
85,418	+		GFF3197	0.11	-0.0
85,418	+		GFF3197	0.11	+0.4
85,419	-		GFF3197	0.12	+0.6
85,619	+		GFF3197	0.48	-0.2
85,619	+		GFF3197	0.48	-0.4
85,620	-		GFF3197	0.48	+0.9
86,091	-				-0.1
86,091	-				-0.1
86,318	+		GFF3198	0.22	+0.2
86,349	-		GFF3198	0.28	+1.3
86,705	+				-0.2
86,705	+				+1.6
86,705	+				-0.7
86,706	-				-0.5
87,057	+		GFF3199	0.43	+0.3
87,165	+		GFF3199	0.57	-0.2
87,597	-		GFF3200	0.25	-0.0