Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2547

Experiment: Ying_AminoAcid20 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 1
133,528	+		GFF2545	0.70	-0.6
133,529	-		GFF2545	0.70	-0.5
133,842	-				-0.7
134,108	+		GFF2546	0.53	+0.1
134,108	+		GFF2546	0.53	+0.3
134,109	-		GFF2546	0.53	+0.1
134,109	-		GFF2546	0.53	-0.0
134,708	-		GFF2547	0.29	-1.4
135,067	+		GFF2547	0.60	-0.2
135,113	-		GFF2547	0.64	+1.5
135,181	+		GFF2547	0.70	-0.5
135,181	+		GFF2547	0.70	+0.1
135,181	+		GFF2547	0.70	-1.3
135,182	-		GFF2547	0.70	-0.2
135,328	+		GFF2547	0.83	-0.9
135,329	-		GFF2547	0.83	+0.7
135,329	-		GFF2547	0.83	-0.3
135,467	-				+0.1
135,467	-				-1.0
135,487	+				+0.1
135,488	-				-0.6
135,488	-				-0.3
135,488	-				+0.3
136,077	+		GFF2548	0.50	-0.8
136,078	-		GFF2548	0.50	-0.2
136,078	-		GFF2548	0.50	+0.1
136,078	-		GFF2548	0.50	-0.4
136,204	-		GFF2548	0.61	+0.4
136,518	+		GFF2548	0.89	-0.6
136,518	+		GFF2548	0.89	+0.1
136,519	-		GFF2548	0.89	-0.1