Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01428

Experiment: Xylan from Beechwood 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from Beechwood 2.5 mg/mL (C)
85,004	-				-0.6
85,084	+				-0.6
85,113	+				+0.2
85,114	-				+0.8
85,160	+				+0.4
85,161	-				+1.7
85,345	+		BACOVA_01427	0.24	-2.4
85,346	-		BACOVA_01427	0.24	+0.4
85,346	-		BACOVA_01427	0.24	-0.2
85,352	+		BACOVA_01427	0.25	-0.5
85,352	+		BACOVA_01427	0.25	-0.2
85,352	+		BACOVA_01427	0.25	-3.5
85,380	+		BACOVA_01427	0.28	-0.1
85,392	+		BACOVA_01427	0.30	+0.1
85,407	+		BACOVA_01427	0.32	-0.0
85,460	+		BACOVA_01427	0.38	+0.6
85,460	+		BACOVA_01427	0.38	+0.3
85,486	+		BACOVA_01427	0.42	-1.4
85,567	-		BACOVA_01427	0.52	+0.5
85,568	+		BACOVA_01427	0.52	-0.4
85,590	+		BACOVA_01427	0.55	+0.2
85,627	+		BACOVA_01427	0.60	+0.4
85,650	-		BACOVA_01427	0.62	-1.6
85,699	+		BACOVA_01427	0.69	-0.9
85,700	-		BACOVA_01427	0.69	-0.8
85,772	-		BACOVA_01427	0.78	-0.3
85,823	-		BACOVA_01427	0.84	-0.8
85,864	-		BACOVA_01427	0.90	-0.2
85,893	-				-0.8
85,921	-				+0.0
85,927	-				+0.8
85,927	-				+0.6
85,956	+				+0.1
85,958	+				-1.0
85,959	-				-0.2
85,959	-				+1.2
85,959	-				-0.1
85,959	-				-0.3
85,961	+				-1.5
85,962	-				-0.3
86,027	+				-1.0
86,028	-				-1.1
86,028	-				-0.6
86,068	-				+0.5
86,108	+				-0.7
86,108	+				-2.7
86,109	-				+0.7
86,131	-		BACOVA_01428	0.11	+0.9
86,223	-		BACOVA_01428	0.18	-1.1
86,308	-		BACOVA_01428	0.24	-1.2
86,331	-		BACOVA_01428	0.26	+0.9
86,514	-		BACOVA_01428	0.40	-0.7
86,624	+		BACOVA_01428	0.48	+1.0
86,736	+		BACOVA_01428	0.56	-1.2
86,736	+		BACOVA_01428	0.56	-1.3
86,736	+		BACOVA_01428	0.56	+0.7
86,737	-		BACOVA_01428	0.56	+0.0
86,737	-		BACOVA_01428	0.56	+1.4
86,737	-		BACOVA_01428	0.56	-0.6
86,938	+		BACOVA_01428	0.71	-0.4
87,035	-		BACOVA_01428	0.79	+0.7
87,112	+		BACOVA_01428	0.84	+1.6
87,112	+		BACOVA_01428	0.84	-0.8
87,113	-		BACOVA_01428	0.85	-0.2
87,113	-		BACOVA_01428	0.85	+0.1
87,113	-		BACOVA_01428	0.85	-0.7
87,114	+		BACOVA_01428	0.85	+0.8
87,114	+		BACOVA_01428	0.85	-0.0
87,115	-		BACOVA_01428	0.85	-0.8
87,115	-		BACOVA_01428	0.85	-0.1
87,115	-		BACOVA_01428	0.85	+2.2
87,149	-		BACOVA_01428	0.87	-1.1
87,151	-		BACOVA_01428	0.87	-0.3
87,151	-		BACOVA_01428	0.87	+0.2
87,151	-		BACOVA_01428	0.87	-0.9
87,164	+		BACOVA_01428	0.88	+0.5
87,165	-		BACOVA_01428	0.88	-2.9
87,213	+				+0.6
87,213	+				-1.0
87,219	-				+0.4
87,226	-				+0.2
87,226	-				-2.0
87,394	+				+0.3
87,394	+				+0.2
87,395	-				-0.7
87,399	+				-0.8
87,399	+				+0.3
87,400	-				+0.1
87,400	-				+1.0
87,401	+				+2.6
87,401	+				-1.1
87,401	+				-0.3
87,401	+				+0.7
87,402	-				+1.3
87,403	+				+0.5
87,404	-				-0.1
87,404	-				-0.7
87,414	-				-0.2
87,420	-				+0.5
87,435	+				+0.0
87,457	+				+0.5
87,458	-				+0.4
87,458	-				-1.4
87,458	-				+0.7
87,461	-				-0.5
87,527	-				+1.3
87,540	+		BACOVA_01429	0.10	-0.5
87,646	+		BACOVA_01429	0.21	+0.2
87,647	-		BACOVA_01429	0.22	-0.5
87,647	-		BACOVA_01429	0.22	-0.5
87,860	+		BACOVA_01429	0.44	-0.3
87,861	-		BACOVA_01429	0.44	-2.0
87,862	+		BACOVA_01429	0.44	-1.0
87,862	+		BACOVA_01429	0.44	+1.1
87,862	+		BACOVA_01429	0.44	-0.6
87,863	-		BACOVA_01429	0.44	-0.3
87,866	+		BACOVA_01429	0.45	-0.1
87,869	-		BACOVA_01429	0.45	-2.4
87,874	+		BACOVA_01429	0.45	-1.7
87,874	+		BACOVA_01429	0.45	+0.9
87,875	-		BACOVA_01429	0.46	+0.1
87,878	+		BACOVA_01429	0.46	+0.3
87,883	+		BACOVA_01429	0.46	+0.2
87,883	+		BACOVA_01429	0.46	-0.1
87,910	+		BACOVA_01429	0.49	-1.7
87,953	-		BACOVA_01429	0.54	-0.9
87,959	+		BACOVA_01429	0.54	-0.3
87,960	-		BACOVA_01429	0.55	+1.4
87,979	+		BACOVA_01429	0.57	-1.3
87,980	-		BACOVA_01429	0.57	-0.9
87,987	-		BACOVA_01429	0.57	-0.2
87,988	+		BACOVA_01429	0.57	+0.1
88,016	-		BACOVA_01429	0.60	-0.4
88,038	-		BACOVA_01429	0.63	-0.0
88,085	-		BACOVA_01429	0.68	-0.1
88,107	-		BACOVA_01429	0.70	-0.6
88,121	-		BACOVA_01429	0.72	+0.6
88,136	+		BACOVA_01429	0.73	+0.3
88,136	+		BACOVA_01429	0.73	+0.5
88,159	+		BACOVA_01429	0.76	-0.3
88,159	+		BACOVA_01429	0.76	-0.0
88,183	-		BACOVA_01429	0.78	+0.0
88,201	+		BACOVA_01429	0.80	+1.1
88,213	+		BACOVA_01429	0.81	+2.7
88,280	+		BACOVA_01429	0.88	+1.5
88,280	+		BACOVA_01429	0.88	-1.0
88,285	+		BACOVA_01429	0.89	-1.0
88,289	+		BACOVA_01429	0.89	+0.2
88,289	+		BACOVA_01429	0.89	-1.6
88,290	-		BACOVA_01429	0.89	+0.2
88,291	+		BACOVA_01429	0.89	+0.2
88,291	+		BACOVA_01429	0.89	-1.8
88,292	-		BACOVA_01429	0.90	-0.3
88,310	+				-0.7
88,310	+				+0.3
88,310	+				+1.4