Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00385

Experiment: Xylan from Beechwood 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from Beechwood 2.5 mg/mL (C)
7,051	-		BACOVA_00383	0.36	-0.5
7,051	-		BACOVA_00383	0.36	+0.3
7,061	-		BACOVA_00383	0.37	-0.7
7,190	+		BACOVA_00383	0.49	-0.1
7,190	+		BACOVA_00383	0.49	+0.0
7,191	-		BACOVA_00383	0.49	-0.5
7,191	-		BACOVA_00383	0.49	+1.8
7,263	+		BACOVA_00383	0.55	-0.5
7,264	-		BACOVA_00383	0.55	+0.5
7,264	-		BACOVA_00383	0.55	+1.8
7,275	+		BACOVA_00383	0.56	+1.6
7,275	+		BACOVA_00383	0.56	+0.2
7,275	+		BACOVA_00383	0.56	-1.5
7,276	-		BACOVA_00383	0.56	-0.1
7,276	-		BACOVA_00383	0.56	+0.9
7,277	+		BACOVA_00383	0.56	+1.0
7,277	+		BACOVA_00383	0.56	-0.6
7,277	+		BACOVA_00383	0.56	-0.7
7,278	-		BACOVA_00383	0.56	+0.7
7,278	-		BACOVA_00383	0.56	-0.5
7,342	+		BACOVA_00383	0.62	-0.4
7,343	-		BACOVA_00383	0.62	+0.1
7,414	+		BACOVA_00383	0.68	+1.8
7,451	+		BACOVA_00383	0.72	-0.3
7,520	-		BACOVA_00383	0.78	-0.2
7,535	+		BACOVA_00383	0.79	-1.1
7,535	+		BACOVA_00383	0.79	+0.1
7,536	-		BACOVA_00383	0.79	-0.1
7,585	+		BACOVA_00383	0.84	+0.0
7,586	-		BACOVA_00383	0.84	-0.6
7,670	+				+2.2
7,751	+				+0.3
7,755	+				-0.3
7,756	-				-0.5
7,818	-		BACOVA_00384	0.28	+0.2
7,818	-		BACOVA_00384	0.28	-1.5
7,820	+		BACOVA_00384	0.30	-0.8
7,840	+		BACOVA_00384	0.40	+1.4
7,840	+		BACOVA_00384	0.40	-0.7
7,849	+		BACOVA_00384	0.45	-0.2
7,850	-		BACOVA_00384	0.46	-0.8
7,850	-		BACOVA_00384	0.46	+0.8
7,899	+		BACOVA_00384	0.73	+1.7
7,900	-		BACOVA_00384	0.73	-2.7
7,925	+		BACOVA_00384	0.87	+0.2
7,925	+		BACOVA_00384	0.87	-1.7
7,925	+		BACOVA_00384	0.87	-0.9
7,925	+		BACOVA_00384	0.87	-2.1
7,925	+		BACOVA_00384	0.87	+0.4
7,926	-		BACOVA_00384	0.87	+0.4
7,926	-		BACOVA_00384	0.87	+1.1
7,926	-		BACOVA_00384	0.87	+0.3
7,926	-		BACOVA_00384	0.87	-0.3
7,927	+		BACOVA_00384	0.88	+0.1
7,944	+				-0.5
7,979	+				+1.4
8,036	+				+0.9
8,036	+				+0.2
8,062	-				+0.2
8,101	-				-0.3
8,102	+				-0.1
8,245	-				+0.5
8,248	-				+0.5
8,257	+		BACOVA_00385	0.10	-0.1
8,316	+		BACOVA_00385	0.13	-1.6
8,317	-		BACOVA_00385	0.13	-0.4
8,317	-		BACOVA_00385	0.13	-0.7
8,317	-		BACOVA_00385	0.13	-0.0
8,318	+		BACOVA_00385	0.13	+0.7
8,319	-		BACOVA_00385	0.13	+0.4
8,320	+		BACOVA_00385	0.13	+1.1
8,321	-		BACOVA_00385	0.13	-0.2
8,450	+		BACOVA_00385	0.19	+0.1
8,451	-		BACOVA_00385	0.19	-0.5
8,467	-		BACOVA_00385	0.20	-2.2
8,533	+		BACOVA_00385	0.23	-0.9
8,539	-		BACOVA_00385	0.23	-1.3
8,552	+		BACOVA_00385	0.24	-1.1
8,613	-		BACOVA_00385	0.27	+1.6
8,620	+		BACOVA_00385	0.27	-0.2
8,623	+		BACOVA_00385	0.27	-0.1
8,623	+		BACOVA_00385	0.27	-1.3
8,648	+		BACOVA_00385	0.28	+1.4
8,667	+		BACOVA_00385	0.29	-0.6
8,798	+		BACOVA_00385	0.35	-1.0
8,798	+		BACOVA_00385	0.35	-0.4
8,799	-		BACOVA_00385	0.35	+0.3
8,871	-		BACOVA_00385	0.39	+0.3
8,871	-		BACOVA_00385	0.39	-0.9
8,874	+		BACOVA_00385	0.39	+0.9
8,973	+		BACOVA_00385	0.43	+1.4
9,021	-		BACOVA_00385	0.46	-0.9
9,021	-		BACOVA_00385	0.46	-2.5
9,022	+		BACOVA_00385	0.46	-2.1
9,023	-		BACOVA_00385	0.46	+0.8
9,043	+		BACOVA_00385	0.47	-0.3
9,043	+		BACOVA_00385	0.47	-0.1
9,112	+		BACOVA_00385	0.50	+0.0
9,113	-		BACOVA_00385	0.50	+0.7
9,113	-		BACOVA_00385	0.50	-0.0
9,113	-		BACOVA_00385	0.50	+1.2
9,146	-		BACOVA_00385	0.52	-0.6
9,264	+		BACOVA_00385	0.57	-1.3
9,349	-		BACOVA_00385	0.61	+0.1
9,349	-		BACOVA_00385	0.61	-0.1
9,350	+		BACOVA_00385	0.61	-1.7
9,459	+		BACOVA_00385	0.66	+0.0
9,464	+		BACOVA_00385	0.66	-2.1
9,465	-		BACOVA_00385	0.66	-1.2
9,499	-		BACOVA_00385	0.68	+0.4
9,565	-		BACOVA_00385	0.71	+0.2
9,608	+		BACOVA_00385	0.73	-0.3
9,608	+		BACOVA_00385	0.73	-0.7
9,608	+		BACOVA_00385	0.73	+0.6
9,683	-		BACOVA_00385	0.76	+0.9
9,683	-		BACOVA_00385	0.76	-0.6
9,691	-		BACOVA_00385	0.77	-0.8
9,719	-		BACOVA_00385	0.78	-1.3
9,747	-		BACOVA_00385	0.79	-0.4
9,794	+		BACOVA_00385	0.82	+0.1
9,847	-		BACOVA_00385	0.84	-1.5
9,847	-		BACOVA_00385	0.84	+0.8
9,904	+		BACOVA_00385	0.87	+0.3
9,909	+		BACOVA_00385	0.87	-0.9
9,910	-		BACOVA_00385	0.87	-0.5
9,913	-		BACOVA_00385	0.87	-1.8
9,975	+		BACOVA_00385	0.90	-0.1
10,043	+				+0.2
10,174	+				-0.1
10,174	+				+0.2
10,175	-				+0.6
10,175	-				+1.7
10,199	-				-0.1
10,220	-				-4.4
10,220	-				+0.6
10,228	+				-0.5
10,263	-				-1.3
10,278	+				-1.1
10,281	+				+1.0
10,282	-				-1.1
10,282	-				+0.8
10,437	+		BACOVA_00386	0.11	-0.4
10,437	+		BACOVA_00386	0.11	+1.0
10,438	-		BACOVA_00386	0.11	+0.1
10,438	-		BACOVA_00386	0.11	+0.2
10,438	-		BACOVA_00386	0.11	+0.6
10,545	+		BACOVA_00386	0.16	-0.4
10,545	+		BACOVA_00386	0.16	-0.6
10,561	-		BACOVA_00386	0.17	+0.0
10,572	-		BACOVA_00386	0.18	+0.3
10,572	-		BACOVA_00386	0.18	-0.9
10,572	-		BACOVA_00386	0.18	+0.4
10,595	+		BACOVA_00386	0.19	-1.4
10,595	+		BACOVA_00386	0.19	-0.6
10,595	+		BACOVA_00386	0.19	-0.3
10,609	-		BACOVA_00386	0.19	-0.1
10,613	+		BACOVA_00386	0.19	+0.9
10,614	-		BACOVA_00386	0.20	-2.5
10,687	-		BACOVA_00386	0.23	-0.3
10,688	+		BACOVA_00386	0.23	-0.4
10,688	+		BACOVA_00386	0.23	-1.2
10,688	+		BACOVA_00386	0.23	+0.2
10,709	-		BACOVA_00386	0.24	+0.3
10,722	+		BACOVA_00386	0.25	-1.8
10,765	-		BACOVA_00386	0.27	+0.3
10,869	-		BACOVA_00386	0.31	-2.1
10,869	-		BACOVA_00386	0.31	-0.6
10,872	+		BACOVA_00386	0.31	+0.6
10,873	-		BACOVA_00386	0.32	+1.6
10,873	-		BACOVA_00386	0.32	-1.1
10,873	-		BACOVA_00386	0.32	-0.8
10,923	+		BACOVA_00386	0.34	+1.6
10,929	+		BACOVA_00386	0.34	+0.3
10,929	+		BACOVA_00386	0.34	-1.0
10,964	+		BACOVA_00386	0.36	+0.9
10,964	+		BACOVA_00386	0.36	-0.4
10,964	+		BACOVA_00386	0.36	+1.2
10,966	+		BACOVA_00386	0.36	-2.7
10,966	+		BACOVA_00386	0.36	-1.1
10,966	+		BACOVA_00386	0.36	-0.3
10,966	+		BACOVA_00386	0.36	+0.8
10,966	+		BACOVA_00386	0.36	-1.1
11,013	-		BACOVA_00386	0.38	-2.5
11,022	+		BACOVA_00386	0.38	+0.1
11,036	+		BACOVA_00386	0.39	-0.2
11,036	+		BACOVA_00386	0.39	-1.5
11,037	-		BACOVA_00386	0.39	-0.7
11,136	+		BACOVA_00386	0.44	+0.0
11,169	-		BACOVA_00386	0.45	+0.1
11,169	-		BACOVA_00386	0.45	-0.1