Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5601

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
2,618,492	+		GFF5600	0.36	+0.2
2,618,493	-		GFF5600	0.36	-0.9
2,618,658	-		GFF5600	0.55	-0.8
2,618,727	-		GFF5600	0.63	-0.1
2,618,906	+		GFF5600	0.83	-0.1
2,618,906	+		GFF5600	0.83	-0.4
2,618,907	-		GFF5600	0.83	+0.0
2,619,038	+				+0.1
2,619,038	+				+0.1
2,619,039	-				-0.5
2,619,969	-				+0.9
2,620,088	+				-0.9
2,620,088	+				+0.3
2,620,089	-		GFF5806	0.11	+0.5
2,620,206	+				+0.0
2,620,206	+				-2.3
2,620,390	-				+0.5
2,620,891	+		GFF5602	0.47	-0.0
2,620,892	-		GFF5602	0.47	+0.7