Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5297

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
2,307,871	+		GFF5295	0.71	+0.3
2,308,027	-		GFF5295	0.89	-0.4
2,308,042	-				+0.3
2,308,089	+				+0.7
2,308,090	-				+0.1
2,308,092	+				+0.5
2,308,186	+				-0.2
2,308,868	+				-0.5
2,309,144	-		GFF5297	0.33	+0.9
2,309,145	-		GFF5297	0.33	+0.3
2,309,267	+		GFF5297	0.45	-0.0
2,309,790	-				+0.3
2,309,948	-				-0.1
2,310,295	+		GFF5298	0.14	+0.5
2,310,296	-		GFF5298	0.14	+0.5
2,310,334	+		GFF5298	0.17	+0.1
2,310,724	+		GFF5298	0.52	-0.5
2,310,724	+		GFF5298	0.52	-0.0
2,310,725	-		GFF5298	0.52	-0.6
2,310,725	-		GFF5298	0.52	-0.3