Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5268

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
2,280,798	+		GFF5266	0.62	-0.5
2,280,807	+		GFF5266	0.62	-0.5
2,281,167	+		GFF5266	0.87	-0.0
2,281,705	+				+1.1
2,281,705	+				+1.1
2,281,705	+				-0.3
2,281,705	+				-0.5
2,281,705	+				-1.1
2,281,705	+				+0.7
2,281,706	-				-0.4
2,281,947	+		GFF5268	0.24	+0.5
2,281,947	+		GFF5268	0.24	-0.3
2,281,947	+		GFF5268	0.24	-0.8
2,281,948	-		GFF5268	0.24	-0.3
2,282,085	+		GFF5268	0.41	-0.7
2,282,085	+		GFF5268	0.41	-2.1
2,282,086	-		GFF5268	0.41	-1.4
2,282,127	+		GFF5268	0.47	+0.1
2,282,127	+		GFF5268	0.47	-0.1
2,282,364	+		GFF5268	0.77	-0.9
2,282,379	+		GFF5268	0.79	-0.9
2,282,380	-		GFF5268	0.79	-0.1
2,282,380	-		GFF5268	0.79	-1.2
2,282,380	-		GFF5268	0.79	+0.0
2,282,776	+		GFF5269	0.15	-0.5
2,283,314	-		GFF5269	0.49	-0.3
2,283,314	-		GFF5269	0.49	+0.3