Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4714

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,666,948	-				+1.0
1,667,057	+		GFF4713	0.13	-0.1
1,667,345	+		GFF4713	0.82	+0.3
1,667,351	+		GFF4713	0.83	+0.2
1,667,437	+				-1.2
1,667,437	+				-0.1
1,667,458	+		GFF4714	0.10	+0.4
1,667,459	-		GFF4714	0.10	+0.5
1,667,535	+		GFF4714	0.27	-0.8
1,667,535	+		GFF4714	0.27	-1.3
1,667,536	-		GFF4714	0.28	+0.5
1,667,536	-		GFF4714	0.28	+0.1
1,667,919	+				+0.1
1,667,920	-				-0.2
1,667,920	-				+0.0
1,668,486	+				+0.0
1,668,487	-				+0.4
1,668,487	-				-1.0