Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4661

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,612,345	+				-0.4
1,612,345	+				-0.1
1,612,345	+				-0.5
1,612,346	-				-0.3
1,612,346	-				-0.6
1,612,346	-				-0.3
1,612,675	-		GFF4661	0.27	-0.5
1,612,942	+		GFF4661	0.53	-0.0
1,613,223	+		GFF4661	0.81	-0.5
1,613,223	+		GFF4661	0.81	-1.3
1,613,224	+		GFF4661	0.81	-1.6
1,613,325	+				+0.3
1,613,325	+				+0.2
1,613,325	+				+0.7
1,613,400	+				+0.5
1,613,400	+				+0.2