Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4569

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,511,047	+		GFF4567	0.54	-0.1
1,511,047	+		GFF4567	0.54	-0.5
1,511,048	-		GFF4567	0.54	-1.6
1,511,048	-		GFF4567	0.54	+0.2
1,511,048	-		GFF4567	0.54	-0.1
1,511,134	+		GFF4567	0.86	-0.0
1,511,135	-		GFF4567	0.86	+0.1
1,511,135	-		GFF4567	0.86	-0.1
1,511,399	-		GFF4568	0.27	+0.5
1,511,399	-		GFF4568	0.27	-0.1
1,511,473	+		GFF4568	0.36	-0.8
1,511,473	+		GFF4568	0.36	+0.2
1,511,473	+		GFF4568	0.36	+0.1
1,511,474	-		GFF4568	0.36	+1.1
1,511,474	-		GFF4568	0.36	-0.0
1,511,474	-		GFF4568	0.36	-0.2
1,511,542	+		GFF4568	0.44	+0.8
1,511,542	+		GFF4568	0.44	-1.4
1,511,542	+		GFF4568	0.44	+0.1
1,511,542	+		GFF4568	0.44	+0.0
1,511,542	+		GFF4568	0.44	-0.2
1,511,542	+		GFF4568	0.44	+0.3
1,511,543	-		GFF4568	0.44	-0.0
1,511,543	-		GFF4568	0.44	-0.9
1,511,543	-		GFF4568	0.44	+0.4
1,511,543	-		GFF4568	0.44	-0.1
1,511,545	+		GFF4568	0.44	-1.8
1,511,545	+		GFF4568	0.44	+0.4
1,511,545	+		GFF4568	0.44	+0.2
1,511,545	+		GFF4568	0.44	-0.1
1,511,545	+		GFF4568	0.44	-0.3
1,511,545	+		GFF4568	0.44	+0.7
1,511,545	+		GFF4568	0.44	-0.8
1,511,545	+		GFF4568	0.44	-0.3
1,511,546	-		GFF4568	0.44	-0.5
1,511,546	-		GFF4568	0.44	-0.4
1,511,546	-		GFF4568	0.44	-0.2
1,511,650	+		GFF4568	0.57	-0.1
1,511,650	+		GFF4568	0.57	-1.1
1,511,650	+		GFF4568	0.57	-0.6
1,511,650	+		GFF4568	0.57	-0.3
1,511,650	+		GFF4568	0.57	-1.7
1,511,651	-		GFF4568	0.57	+0.6
1,511,651	-		GFF4568	0.57	-0.1
1,511,651	-		GFF4568	0.57	-0.3
1,511,651	-		GFF4568	0.57	-1.2
1,511,651	-		GFF4568	0.57	-0.1
1,511,651	-		GFF4568	0.57	-0.4
1,511,860	+		GFF4568	0.82	-0.4
1,511,861	-		GFF4568	0.82	-0.5
1,511,861	-		GFF4568	0.82	+0.1
1,512,076	+				-0.7
1,512,548	+		GFF4569	0.54	-0.6
1,512,640	+		GFF4569	0.64	-0.4
1,512,641	-		GFF4569	0.64	-0.0
1,513,026	-				-0.4
1,513,284	-		GFF4570	0.15	-0.4
1,513,319	+		GFF4570	0.16	-0.6
1,513,343	+		GFF4570	0.18	+0.3
1,513,343	+		GFF4570	0.18	-0.7
1,513,343	+		GFF4570	0.18	+0.6
1,513,343	+		GFF4570	0.18	-0.4
1,513,343	+		GFF4570	0.18	+0.4
1,513,344	-		GFF4570	0.18	-0.6
1,513,358	+		GFF4570	0.18	+0.1
1,513,358	+		GFF4570	0.18	+0.1
1,513,358	+		GFF4570	0.18	-0.8
1,513,358	+		GFF4570	0.18	-0.1
1,513,359	-		GFF4570	0.18	+0.0
1,513,379	+		GFF4570	0.19	+1.8
1,513,380	-		GFF4570	0.19	-0.1
1,513,380	-		GFF4570	0.19	+0.7
1,513,502	+		GFF4570	0.26	+0.7
1,513,911	-		GFF4570	0.46	+0.8
1,513,911	-		GFF4570	0.46	+0.5
1,513,911	-		GFF4570	0.46	-0.3