Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4153

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,068,866	+				-0.3
1,068,866	+				-0.6
1,068,867	-				+0.6
1,068,867	-				-0.1
1,068,874	+				-0.1
1,068,875	-				+0.0
1,068,875	-				-0.6
1,069,007	+				-0.3
1,069,012	+				+0.2
1,069,065	+				-0.6
1,069,065	+				-0.1
1,069,066	-				-0.1
1,069,074	+				+0.1
1,069,110	+				+0.1
1,069,110	+				+0.2
1,069,110	+				-0.4
1,069,110	+				-0.5
1,069,112	+				+0.3
1,069,113	-				+0.6
1,069,129	+				-0.1
1,069,130	-				+0.6
1,069,130	-				-0.3
1,069,132	-				-0.9
1,069,132	-				+0.0
1,069,168	+				+0.2
1,069,168	+				-0.3
1,069,169	-				+0.1
1,069,169	-				-0.6
1,069,235	-				-0.2
1,069,254	+				+0.7
1,069,279	+				+0.8
1,069,279	+				+0.3
1,069,279	+				+0.3
1,069,279	+				+0.4
1,069,279	+				-1.2
1,069,280	-				+0.3
1,069,280	-				-0.2
1,069,280	-				+0.9
1,069,280	-				-0.1
1,069,280	-				-0.5
1,069,305	-				+0.2
1,069,312	+				+0.9
1,069,312	+				-0.5
1,069,343	+				+0.1
1,069,344	-				-0.5
1,069,460	+				-0.1
1,069,460	+				-0.1
1,069,461	-				-0.3
1,069,461	-				-0.2
1,069,461	-				+0.6
1,069,461	-				+0.1
1,069,461	-				+0.5
1,069,461	-				+0.2
1,069,474	-				-0.5
1,069,517	+				+0.1
1,069,518	-				+0.2
1,069,525	+				-0.2
1,069,547	+				-1.0
1,069,600	+				-0.3
1,069,623	-				-0.5
1,069,662	+				+0.0
1,069,662	+				+0.4
1,069,663	-				-0.3
1,069,668	+				-0.7
1,069,669	-				+0.1
1,069,669	-				-0.6
1,069,669	-				-0.1
1,069,689	+				+0.2
1,069,689	+				+0.5
1,069,690	-				-0.8
1,069,701	+				+0.5
1,069,744	+				+0.2
1,069,814	+				+0.2
1,069,815	-				+0.0
1,069,815	-				+0.8
1,069,845	-				+0.0
1,070,053	+				-0.5
1,070,091	+				-0.6
1,070,208	+				-0.2
1,070,217	+				-0.8
1,070,274	+				-0.6
1,070,435	+				+0.1
1,070,436	-				+1.2
1,070,447	+				+0.1
1,070,448	-				+0.2
1,070,448	-				+0.2
1,070,658	+				+0.0
1,070,763	+		GFF4154	0.11	+0.0
1,070,845	-		GFF4154	0.20	+0.6
1,070,850	+		GFF4154	0.21	+0.1
1,070,850	+		GFF4154	0.21	+0.3
1,070,850	+		GFF4154	0.21	-0.4
1,070,850	+		GFF4154	0.21	+0.3
1,070,850	+		GFF4154	0.21	+0.0
1,070,850	+		GFF4154	0.21	+0.2
1,070,850	+		GFF4154	0.21	-0.4
1,070,850	+		GFF4154	0.21	-0.1
1,070,850	+		GFF4154	0.21	+0.2
1,070,850	+		GFF4154	0.21	+0.1
1,070,850	+		GFF4154	0.21	+0.1
1,070,850	+		GFF4154	0.21	-0.2
1,070,850	+		GFF4154	0.21	-0.3
1,070,850	+		GFF4154	0.21	+0.1
1,070,850	+		GFF4154	0.21	+0.3
1,070,850	+		GFF4154	0.21	+0.2
1,070,850	+		GFF4154	0.21	+0.6
1,070,851	-		GFF4154	0.21	-0.6
1,070,851	-		GFF4154	0.21	+0.3
1,070,851	-		GFF4154	0.21	-0.5
1,070,851	-		GFF4154	0.21	+0.1
1,070,851	-		GFF4154	0.21	+0.2
1,070,851	-		GFF4154	0.21	-0.4
1,070,851	-		GFF4154	0.21	-0.3
1,070,851	-		GFF4154	0.21	+0.1
1,070,851	-		GFF4154	0.21	-0.2
1,070,851	-		GFF4154	0.21	-0.2
1,070,851	-		GFF4154	0.21	+0.3
1,070,851	-		GFF4154	0.21	-0.5
1,070,851	-		GFF4154	0.21	-0.2
1,070,851	-		GFF4154	0.21	+0.7
1,070,852	+		GFF4154	0.21	-0.4
1,070,852	+		GFF4154	0.21	-0.7
1,070,853	-		GFF4154	0.21	+0.3
1,070,881	+		GFF4154	0.24	+1.3
1,070,881	+		GFF4154	0.24	-0.0
1,070,881	+		GFF4154	0.24	-0.4
1,070,882	-		GFF4154	0.24	+0.2
1,070,882	-		GFF4154	0.24	+0.1