Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3172

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
48,684	+		GFF3171	0.44	-0.4
48,684	+		GFF3171	0.44	+0.8
48,688	+		GFF3171	0.45	+1.6
48,689	-		GFF3171	0.45	+0.5
49,156	+				-0.0
49,156	+				-0.9
49,156	+				-0.4
49,157	-				-0.9
49,157	-				-1.0
49,157	-				-1.3
49,157	-				+1.9
49,157	-				+0.3
49,164	+				-1.2
49,764	-				+0.2
50,005	+				+0.2
50,636	+		GFF3173	0.32	+1.0
50,742	-		GFF3173	0.38	+0.7
50,742	-		GFF3173	0.38	+1.1