Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1575

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
430,263	-		GFF1574	0.22	+0.0
430,421	+		GFF1574	0.42	-1.3
430,421	+		GFF1574	0.42	+0.3
430,936	+				+0.4
430,937	-				+0.4
430,937	-				+0.7
430,938	+				-1.3
430,938	+				+0.7
430,939	-				+0.7
430,939	-				-0.8
431,159	+		GFF1575	0.18	-1.1
431,252	+		GFF1575	0.33	-0.4
431,312	+		GFF1575	0.42	-0.3
431,508	-		GFF1575	0.72	-1.3
431,780	+				+0.3
431,780	+				-0.2
431,781	-				+0.0
432,261	-		GFF1576	0.61	-0.5
432,261	-		GFF1576	0.61	-0.0
432,416	+		GFF1576	0.78	+0.9
432,416	+		GFF1576	0.78	-0.8