Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF929

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
659,927	-		GFF928	0.23	+0.2
660,352	+		GFF928	0.59	-0.8
660,353	-		GFF928	0.59	-0.5
660,353	-		GFF928	0.59	-0.2
660,395	+		GFF928	0.63	+0.3
660,673	+		GFF928	0.86	+0.3
660,674	-		GFF928	0.86	+0.6
660,680	-		GFF928	0.87	+0.6
660,680	-		GFF928	0.87	-0.1
660,688	+		GFF928	0.87	+0.4
660,688	+		GFF928	0.87	+0.7
660,689	-		GFF928	0.88	+0.5
660,710	-		GFF928	0.89	-0.3
660,843	-				-1.4
660,920	-		GFF929	0.11	-0.5
661,238	+				-0.1
661,239	-				-1.5
661,326	-				-0.6
661,329	-				+0.1
661,727	-				+0.1
661,727	-				-0.1
661,807	-				+0.2
661,851	+				+0.1
661,851	+				+0.5
661,852	-				-0.1
661,852	-				+0.6
661,967	-				+0.2
662,038	-				+0.2
662,038	-				-0.9
662,038	-				+0.3
662,038	-				-0.9
662,047	+				-0.4
662,047	+				+0.2
662,048	-				+0.3
662,048	-				-0.0
662,048	-				-1.2
662,048	-				-0.9
662,048	-				+0.6
662,048	-				+0.2
662,050	-				-0.9
662,135	+				+0.2