Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF729

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
407,520	+		GFF728	0.35	+1.3
407,520	+		GFF728	0.35	+0.9
407,520	+		GFF728	0.35	+0.6
407,520	+		GFF728	0.35	-0.0
407,520	+		GFF728	0.35	-0.3
407,521	-		GFF728	0.35	-0.1
407,521	-		GFF728	0.35	-1.4
407,521	-		GFF728	0.35	+0.4
407,862	+		GFF728	0.63	+0.0
407,862	+		GFF728	0.63	-0.0
407,862	+		GFF728	0.63	+0.6
407,863	-		GFF728	0.63	-0.9
407,863	-		GFF728	0.63	+1.1
408,076	-		GFF728	0.80	-0.4
408,147	+		GFF728	0.86	+1.5
408,147	+		GFF728	0.86	-0.5
408,147	+		GFF728	0.86	+0.2
408,325	+				-0.0
408,326	-				+0.1
408,361	+				-0.3
408,361	+				+0.7
408,500	-		GFF729	0.13	-1.8
408,500	-		GFF729	0.13	-0.8
408,520	+		GFF729	0.15	-0.8
408,520	+		GFF729	0.15	-0.0
408,521	-		GFF729	0.15	-0.7
409,114	+		GFF729	0.66	+1.9
409,115	-		GFF729	0.66	+0.5
409,430	-				+0.4
409,433	+				-1.4
409,435	+				-0.3
409,436	-				-0.2
409,767	+		GFF730	0.33	-1.6
409,767	+		GFF730	0.33	-0.3
409,767	+		GFF730	0.33	-0.0
409,768	-		GFF730	0.33	+0.1
409,768	-		GFF730	0.33	-0.2
409,768	-		GFF730	0.33	+0.3
409,932	+		GFF730	0.86	-0.2
409,933	-		GFF730	0.86	+0.6
410,077	+				+0.1
410,078	-				-1.4
410,078	-				+0.7
410,200	+		GFF731	0.22	+0.6
410,200	+		GFF731	0.22	-0.6
410,200	+		GFF731	0.22	-0.7
410,201	-		GFF731	0.22	+1.2
410,201	-		GFF731	0.22	+0.5
410,491	+		GFF731	0.51	-0.2
410,492	-		GFF731	0.51	+0.2
410,492	-		GFF731	0.51	+0.8
410,498	-		GFF731	0.52	+0.0