Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5714

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
2,739,144	+		GFF5713	0.68	-0.2
2,739,144	+		GFF5713	0.68	+0.2
2,739,145	-		GFF5713	0.68	-0.1
2,739,145	-		GFF5713	0.68	+1.4
2,739,205	+		GFF5713	0.72	-1.1
2,739,206	-		GFF5713	0.72	-1.6
2,739,206	-		GFF5713	0.72	+0.1
2,739,206	-		GFF5713	0.72	+1.0
2,739,216	-		GFF5713	0.73	+0.3
2,739,216	-		GFF5713	0.73	-0.4
2,739,239	+		GFF5713	0.75	+1.1
2,739,240	-		GFF5713	0.75	+0.1
2,739,480	-				+0.4
2,739,603	+				+0.6
2,739,603	+				+1.8
2,739,603	+				+0.6
2,739,603	+				+0.9
2,739,603	+				+0.1
2,739,603	+				+0.3
2,739,604	-				+0.8
2,739,604	-				+0.0
2,739,604	-				+0.2
2,739,693	+				-0.7
2,739,749	+				-1.9
2,739,750	-				-0.2
2,740,039	+		GFF5714	0.12	-1.2
2,740,039	+		GFF5714	0.12	-0.5
2,740,039	+		GFF5714	0.12	+0.1
2,740,040	-		GFF5714	0.12	-0.0
2,740,211	-		GFF5714	0.32	+0.2
2,740,289	+		GFF5714	0.41	-0.5
2,740,289	+		GFF5714	0.41	-0.5
2,740,323	-		GFF5714	0.45	+0.2
2,740,327	+		GFF5714	0.46	-0.5
2,740,328	-		GFF5714	0.46	+0.1
2,740,594	+		GFF5714	0.77	+0.1
2,740,595	-		GFF5714	0.78	-0.0
2,740,595	-		GFF5714	0.78	+0.0
2,740,595	-		GFF5714	0.78	-0.4
2,740,595	-		GFF5714	0.78	+0.0
2,740,595	-		GFF5714	0.78	-0.6
2,740,771	+				+0.1
2,740,772	-				+0.6
2,741,067	-		GFF5715	0.32	-0.5
2,741,076	-		GFF5715	0.33	+0.7
2,741,490	-		GFF5715	0.82	+1.4
2,741,490	-		GFF5715	0.82	+0.1