Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5642

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
2,663,937	+		GFF5641	0.50	-0.0
2,664,429	+				-0.5
2,664,677	+		GFF5642	0.25	-1.2
2,664,678	-		GFF5642	0.25	+1.0
2,664,678	-		GFF5642	0.25	+0.2
2,664,698	+		GFF5642	0.28	-0.2
2,664,698	+		GFF5642	0.28	+0.1
2,664,698	+		GFF5642	0.28	+0.4
2,664,861	-		GFF5642	0.46	+0.1
2,665,188	-		GFF5642	0.84	+0.4
2,665,188	-		GFF5642	0.84	+0.3
2,665,244	+				-0.2
2,665,322	+				-0.1
2,665,322	+				-0.1
2,665,323	-				+0.1
2,665,343	-				-1.9
2,665,343	-				-0.2
2,665,343	-				+0.9
2,665,859	-		GFF5643	0.29	+0.1
2,666,011	+		GFF5643	0.38	-0.8