Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5012

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
2,026,729	+		GFF5011	0.50	-0.3
2,026,730	-		GFF5011	0.50	-0.6
2,026,730	-		GFF5011	0.50	-0.2
2,027,321	-				-0.3
2,027,487	-				-0.4
2,027,661	+				-1.1
2,027,661	+				+0.2
2,027,662	-				+0.5
2,027,662	-				-1.6
2,028,159	+		GFF5012	0.67	+0.2
2,028,339	+		GFF5012	0.88	-0.1
2,028,339	+		GFF5012	0.88	-0.6
2,028,340	-		GFF5012	0.88	-1.7
2,028,729	-		GFF5013	0.38	+0.2
2,029,261	+				-0.2