Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3393

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
276,399	+				-0.2
276,400	-				+0.6
276,536	+				-0.6
276,536	+				-0.5
276,536	+				-2.2
276,536	+				-0.6
276,536	+				+0.2
276,536	+				+0.0
276,708	+		GFF3392	0.30	-0.2
276,718	-		GFF3392	0.31	-0.1
277,355	+		GFF3393	0.12	-0.5
277,355	+		GFF3393	0.12	-0.7
277,356	-		GFF3393	0.12	+0.8
277,356	-		GFF3393	0.12	-0.1
277,736	+		GFF3393	0.38	-0.3
278,721	+				+0.7
278,721	+				+0.0
279,058	-		GFF3394	0.41	-0.3
279,058	-		GFF3394	0.41	-0.1