Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3277

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
161,418	-		GFF3276	0.48	-0.8
161,930	+		GFF3276	0.81	-0.0
162,021	-		GFF3276	0.86	+0.4
162,084	-				-0.6
162,391	+		GFF3277	0.14	+1.5
162,425	-		GFF3277	0.17	-0.1
162,529	+		GFF3277	0.27	-0.3
162,530	-		GFF3277	0.27	+1.4
162,530	-		GFF3277	0.27	-0.3
162,563	-		GFF3277	0.30	+0.5
162,733	+		GFF3277	0.45	+0.4
162,917	-		GFF3277	0.61	-0.5
163,021	+		GFF3277	0.71	+0.2
163,078	+		GFF3277	0.76	+1.0
163,247	-				+0.1
163,259	+				-0.2
163,501	-		GFF3278	0.18	-0.1
164,208	+				+0.4