Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF13

Experiment: Ying_sugar7 rep C; time point 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF11 and GFF12 are separated by 7 nucleotidesGFF12 and GFF13 are separated by 32 nucleotidesGFF13 and GFF14 are separated by 10 nucleotides GFF11 - Acetolactate synthase large subunit (EC 2.2.1.6), at 8,554 to 9,618 GFF11 GFF12 - Acetolactate synthase large subunit (EC 2.2.1.6), at 9,626 to 10,285 GFF12 GFF13 - Aldehyde dehydrogenase (EC 1.2.1.3), at 10,318 to 10,647 GFF13 GFF14 - Aldehyde dehydrogenase (EC 1.2.1.3), at 10,658 to 11,764 GFF14 Position (kb) 10 11Strain fitness (log2 ratio) -1 0 1at 11.331 kb on - strand, within GFF14

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Per-strain Table

Position Strand Gene LocusTag Fraction Ying_sugar7 rep C; time point 1
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11,331 - GFF14 0.61 +1.0

Or see this region's nucleotide sequence