Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1287

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
142,333	-				+0.1
142,350	+				-0.4
142,473	+		GFF1286	0.19	+0.5
142,473	+		GFF1286	0.19	+0.8
142,473	+		GFF1286	0.19	+0.5
142,473	+		GFF1286	0.19	-0.7
142,474	-		GFF1286	0.19	+2.0
142,474	-		GFF1286	0.19	+0.2
142,474	-		GFF1286	0.19	-0.2
142,494	+		GFF1286	0.22	+1.9
142,494	+		GFF1286	0.22	-0.3
142,494	+		GFF1286	0.22	-0.2
142,494	+		GFF1286	0.22	+0.6
142,494	+		GFF1286	0.22	-0.3
142,494	+		GFF1286	0.22	-0.2
142,494	+		GFF1286	0.22	-0.3
142,495	-		GFF1286	0.22	-0.8
142,495	-		GFF1286	0.22	-1.4
142,495	-		GFF1286	0.22	-0.1
142,587	+		GFF1286	0.32	-0.3
142,587	+		GFF1286	0.32	-2.1
142,587	+		GFF1286	0.32	-0.1
142,587	+		GFF1286	0.32	-0.5
142,587	+		GFF1286	0.32	+0.3
142,588	-		GFF1286	0.32	-0.2
142,588	-		GFF1286	0.32	+0.2
142,588	-		GFF1286	0.32	+0.9
142,588	-		GFF1286	0.32	-1.6
142,588	-		GFF1286	0.32	-0.3
142,608	+		GFF1286	0.35	+0.2
142,608	+		GFF1286	0.35	+0.7
142,608	+		GFF1286	0.35	-0.3
142,609	-		GFF1286	0.35	-0.1
142,609	-		GFF1286	0.35	+1.0
142,644	+		GFF1286	0.39	+0.5
142,644	+		GFF1286	0.39	-0.4
142,644	+		GFF1286	0.39	+0.1
142,645	-		GFF1286	0.39	+0.1
142,645	-		GFF1286	0.39	+0.5
142,707	+		GFF1286	0.46	+2.6
142,707	+		GFF1286	0.46	+1.1
142,851	+		GFF1286	0.62	+0.8
142,851	+		GFF1286	0.62	-1.4
142,851	+		GFF1286	0.62	+0.1
142,851	+		GFF1286	0.62	-0.8
142,851	+		GFF1286	0.62	+0.1
142,851	+		GFF1286	0.62	-0.1
143,189	+				-0.1
143,210	+				-0.5
143,210	+				+0.8
143,210	+				-0.3
143,210	+				+0.7
143,211	-				-1.0
143,211	-				+0.3
143,211	-				-0.4
143,324	+		GFF1287	0.12	+0.4
143,325	-		GFF1287	0.12	-1.0
143,325	-		GFF1287	0.12	-0.3
143,325	-		GFF1287	0.12	+1.4
143,325	-		GFF1287	0.12	+0.0
143,498	+		GFF1287	0.26	-0.6
143,498	+		GFF1287	0.26	+0.2
143,499	-		GFF1287	0.26	-1.1
144,415	+				-0.4
144,415	+				-0.5
144,415	+				-0.0
144,415	+				-0.5
144,415	+				+0.4
144,416	-				-0.3
144,416	-				-0.8
144,416	-				+0.1
144,416	-				-0.1
144,416	-				-0.4
144,441	+				-0.3
144,441	+				+0.0
144,441	+				-0.7
144,441	+				-1.3
144,441	+				-0.6
144,441	+				+0.9
144,441	+				+0.5
144,441	+				+0.7
144,442	-				+0.1
144,442	-				-0.7
144,442	-				+0.6
144,442	-				-0.1
144,443	+				+0.0
144,443	+				+0.7
144,443	+				+0.1
144,443	+				-0.1
144,443	+				-0.2
144,443	+				-0.8
144,443	+				+0.3
144,443	+				-0.5
144,444	-				+0.2
144,444	-				-0.6
144,444	-				+0.7
144,444	-				+0.5
144,444	-				-0.9
144,534	+				-0.8
144,534	+				-0.4
144,534	+				-0.1
144,535	-				-0.5
144,535	-				-1.1
144,669	+				-0.2
144,669	+				-1.7
144,669	+				+0.9
144,669	+				+0.1
144,669	+				+0.7
144,669	+				-0.0
144,670	-				-1.1
144,670	-				+1.1
144,670	-				-0.2
144,670	-				+0.2
144,670	-				-0.2
144,670	-				-0.3
144,670	-				-0.7