Strain Fitness in Escherichia fergusonii Becca around EFB2_03687

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
3,854,108	+		EFB2_03685	0.82	-0.6
3,854,108	+		EFB2_03685	0.82	-1.3
3,854,108	+		EFB2_03685	0.82	-1.4
3,854,109	-		EFB2_03685	0.82	+0.7
3,854,109	-		EFB2_03685	0.82	+0.2
3,854,111	+		EFB2_03685	0.82	-0.3
3,854,111	+		EFB2_03685	0.82	-0.6
3,854,111	+		EFB2_03685	0.82	+1.0
3,854,111	+		EFB2_03685	0.82	+1.6
3,854,111	+		EFB2_03685	0.82	+0.5
3,854,111	+		EFB2_03685	0.82	-0.1
3,854,112	-		EFB2_03685	0.82	+0.0
3,854,112	-		EFB2_03685	0.82	+0.3
3,854,112	-		EFB2_03685	0.82	+0.7
3,854,158	+		EFB2_03685	0.87	+0.2
3,854,159	-		EFB2_03685	0.88	-0.3
3,854,196	+				-2.5
3,854,197	-				+0.6
3,854,226	-				-0.6
3,854,226	-				+3.3
3,854,226	-				+1.5
3,854,226	-				+1.0
3,854,226	-				-0.3
3,854,226	-				+0.0
3,854,227	+				+0.2
3,854,227	+				-0.1
3,854,227	+				-0.1
3,854,227	+				-0.1
3,854,227	+				+2.2
3,854,227	+				-1.2
3,854,227	+				+0.1
3,854,227	+				+0.3
3,854,227	+				+0.3
3,854,228	-				+1.1
3,854,228	-				+1.6
3,854,228	-				+0.5
3,854,228	-				-0.4
3,854,228	-				+0.8
3,854,228	-				+0.5
3,854,228	-				+1.3
3,854,243	+				-0.9
3,854,267	+				+0.7
3,854,267	+				+0.7
3,854,267	+				+0.1
3,854,267	+				+0.7
3,854,267	+				+0.6
3,854,267	+				+0.7
3,854,267	+				-0.2
3,854,267	+				-2.8
3,854,268	-				+0.3
3,854,268	-				-0.6
3,854,268	-				-1.5
3,854,268	-				+0.5
3,854,268	-				-0.1
3,854,268	-				-0.2
3,854,268	-				-0.2
3,854,268	-				-2.2
3,854,268	-				-0.5
3,854,268	-				+0.4
3,854,268	-				+0.7
3,854,268	-				+0.6
3,854,301	-				-0.1
3,854,321	+				-1.7
3,854,404	+		EFB2_03686	0.17	-0.3
3,854,404	+		EFB2_03686	0.17	-1.6
3,854,404	+		EFB2_03686	0.17	-1.1
3,854,404	+		EFB2_03686	0.17	-0.7
3,854,404	+		EFB2_03686	0.17	+0.2
3,854,404	+		EFB2_03686	0.17	-1.2
3,854,404	+		EFB2_03686	0.17	+0.4
3,854,404	+		EFB2_03686	0.17	-0.7
3,854,404	+		EFB2_03686	0.17	-0.9
3,854,404	+		EFB2_03686	0.17	-1.3
3,854,404	+		EFB2_03686	0.17	-1.6
3,854,404	+		EFB2_03686	0.17	-0.6
3,854,405	-		EFB2_03686	0.17	-0.9
3,854,405	-		EFB2_03686	0.17	-0.1
3,854,405	-		EFB2_03686	0.17	+0.8
3,854,405	-		EFB2_03686	0.17	-0.1
3,854,405	-		EFB2_03686	0.17	+0.7
3,854,405	-		EFB2_03686	0.17	-0.8
3,854,405	-		EFB2_03686	0.17	+0.6
3,854,405	-		EFB2_03686	0.17	+0.2
3,854,405	-		EFB2_03686	0.17	+0.3
3,854,405	-		EFB2_03686	0.17	+1.6
3,854,405	-		EFB2_03686	0.17	-0.1
3,854,405	-		EFB2_03686	0.17	+2.1
3,854,405	-		EFB2_03686	0.17	+2.2
3,854,405	-		EFB2_03686	0.17	+0.8
3,854,405	-		EFB2_03686	0.17	+0.0
3,854,452	+		EFB2_03686	0.23	-0.1
3,854,452	+		EFB2_03686	0.23	-0.4
3,854,453	-		EFB2_03686	0.23	+1.3
3,854,453	-		EFB2_03686	0.23	+0.8
3,854,480	+		EFB2_03686	0.26	-1.3
3,854,640	+		EFB2_03686	0.46	-0.7
3,854,641	-		EFB2_03686	0.46	+0.5
3,854,641	-		EFB2_03686	0.46	-1.4
3,854,641	-		EFB2_03686	0.46	+1.2
3,854,641	-		EFB2_03686	0.46	-0.7
3,854,649	-		EFB2_03686	0.47	-0.7
3,854,700	+		EFB2_03686	0.53	-0.6
3,854,700	+		EFB2_03686	0.53	-0.8
3,854,700	+		EFB2_03686	0.53	-0.7
3,854,701	-		EFB2_03686	0.53	-0.1
3,854,701	-		EFB2_03686	0.53	-0.7
3,854,701	-		EFB2_03686	0.53	-3.0
3,854,724	+		EFB2_03686	0.56	+0.9
3,854,735	+		EFB2_03686	0.57	-0.1
3,854,769	-		EFB2_03686	0.61	+1.3
3,854,795	-		EFB2_03686	0.64	-0.3
3,854,875	+		EFB2_03686	0.74	-0.9
3,854,876	-		EFB2_03686	0.74	-2.1
3,854,876	-		EFB2_03686	0.74	-0.5
3,854,876	-		EFB2_03686	0.74	+0.1
3,854,915	+		EFB2_03686	0.79	+0.9
3,854,916	-		EFB2_03686	0.79	-0.5
3,854,947	+		EFB2_03686	0.83	+0.6
3,854,948	-		EFB2_03686	0.83	+0.6
3,854,948	-		EFB2_03686	0.83	-0.8
3,854,978	+		EFB2_03686	0.87	+0.1
3,854,978	+		EFB2_03686	0.87	+0.7
3,854,978	+		EFB2_03686	0.87	+0.3
3,854,978	+		EFB2_03686	0.87	-0.7
3,854,978	+		EFB2_03686	0.87	-0.3
3,854,978	+		EFB2_03686	0.87	+0.8
3,854,978	+		EFB2_03686	0.87	-1.7
3,854,978	+		EFB2_03686	0.87	-1.9
3,854,978	+		EFB2_03686	0.87	-1.6
3,854,978	+		EFB2_03686	0.87	+0.5
3,854,978	+		EFB2_03686	0.87	-0.1
3,854,978	+		EFB2_03686	0.87	-0.7
3,854,978	+		EFB2_03686	0.87	-0.5
3,854,978	+		EFB2_03686	0.87	-0.0
3,854,978	+		EFB2_03686	0.87	-1.5
3,854,978	+		EFB2_03686	0.87	-1.9
3,854,978	+		EFB2_03686	0.87	+1.3
3,854,979	-		EFB2_03686	0.87	+0.3
3,854,979	-		EFB2_03686	0.87	-0.8
3,854,979	-		EFB2_03686	0.87	+1.2
3,854,979	-		EFB2_03686	0.87	-1.2
3,854,979	-		EFB2_03686	0.87	-0.4
3,854,979	-		EFB2_03686	0.87	-1.0
3,854,979	-		EFB2_03686	0.87	+0.5
3,854,979	-		EFB2_03686	0.87	-1.7
3,854,979	-		EFB2_03686	0.87	+0.6
3,854,979	-		EFB2_03686	0.87	+0.2
3,854,979	-		EFB2_03686	0.87	+0.3
3,854,979	-		EFB2_03686	0.87	+0.2
3,854,979	-		EFB2_03686	0.87	-1.2
3,854,979	-		EFB2_03686	0.87	+0.8
3,854,979	-		EFB2_03686	0.87	+0.2
3,854,979	-		EFB2_03686	0.87	-1.5
3,854,979	-		EFB2_03686	0.87	-1.4
3,854,979	-		EFB2_03686	0.87	-0.7
3,854,979	-		EFB2_03686	0.87	-1.2
3,854,979	-		EFB2_03686	0.87	+0.6
3,854,979	-		EFB2_03686	0.87	-1.0
3,855,001	+		EFB2_03686	0.89	+0.7
3,855,001	+		EFB2_03686	0.89	+0.2
3,855,001	+		EFB2_03686	0.89	+0.4
3,855,001	+		EFB2_03686	0.89	-1.6
3,855,001	+		EFB2_03686	0.89	-0.7
3,855,001	+		EFB2_03686	0.89	+0.0
3,855,001	+		EFB2_03686	0.89	+0.5
3,855,001	+		EFB2_03686	0.89	-0.0
3,855,001	+		EFB2_03686	0.89	+0.0
3,855,001	+		EFB2_03686	0.89	+0.4
3,855,001	+		EFB2_03686	0.89	-0.8
3,855,002	-		EFB2_03686	0.89	-0.7
3,855,002	-		EFB2_03686	0.89	-1.5
3,855,002	-		EFB2_03686	0.89	+0.3
3,855,002	-		EFB2_03686	0.89	-0.0
3,855,002	-		EFB2_03686	0.89	+0.4
3,855,002	-		EFB2_03686	0.89	-0.2
3,855,002	-		EFB2_03686	0.89	-0.4
3,855,002	-		EFB2_03686	0.89	+0.8
3,855,002	-		EFB2_03686	0.89	-0.4
3,855,002	-		EFB2_03686	0.89	-0.1
3,855,002	-		EFB2_03686	0.89	-1.4
3,855,002	-		EFB2_03686	0.89	-0.2
3,855,011	+				-0.6
3,855,011	+				+0.1
3,855,011	+				-2.1
3,855,011	+				-0.1
3,855,012	-				-0.1
3,855,012	-				+0.4
3,855,012	-				+0.7
3,855,012	-				+0.5
3,855,012	-				-0.4
3,855,012	-				-0.1
3,855,112	+				-0.1
3,855,112	+				-2.0
3,855,112	+				-0.7
3,855,113	-				-0.6
3,855,113	-				+0.2
3,855,113	-				+0.2
3,855,113	-				-0.3
3,855,121	+				-1.2
3,855,121	+				+0.9
3,855,121	+				+1.2
3,855,122	-				+0.9
3,855,128	+				+0.2
3,855,128	+				-2.0
3,855,129	-				+0.7
3,855,270	+		EFB2_03687	0.24	+0.2
3,855,286	+		EFB2_03687	0.26	-0.2
3,855,286	+		EFB2_03687	0.26	-0.1
3,855,286	+		EFB2_03687	0.26	-1.1
3,855,286	+		EFB2_03687	0.26	-0.4
3,855,286	+		EFB2_03687	0.26	-0.6
3,855,286	+		EFB2_03687	0.26	+0.1
3,855,286	+		EFB2_03687	0.26	-0.7
3,855,286	+		EFB2_03687	0.26	-1.9
3,855,287	-		EFB2_03687	0.26	-0.6
3,855,287	-		EFB2_03687	0.26	+0.8
3,855,287	-		EFB2_03687	0.26	+0.3
3,855,287	-		EFB2_03687	0.26	-0.0
3,855,287	-		EFB2_03687	0.26	-1.2
3,855,287	-		EFB2_03687	0.26	+1.1
3,855,288	+		EFB2_03687	0.26	-1.5
3,855,400	+		EFB2_03687	0.41	-0.7
3,855,400	+		EFB2_03687	0.41	+1.4
3,855,400	+		EFB2_03687	0.41	+0.4
3,855,401	-		EFB2_03687	0.41	-0.3
3,855,403	+		EFB2_03687	0.41	-0.9
3,855,403	+		EFB2_03687	0.41	+0.2
3,855,403	+		EFB2_03687	0.41	+0.4
3,855,403	+		EFB2_03687	0.41	+0.6
3,855,403	+		EFB2_03687	0.41	-2.2
3,855,403	+		EFB2_03687	0.41	-0.8
3,855,403	+		EFB2_03687	0.41	-0.9
3,855,404	-		EFB2_03687	0.42	-0.4
3,855,404	-		EFB2_03687	0.42	+0.5
3,855,404	-		EFB2_03687	0.42	-0.3
3,855,479	+		EFB2_03687	0.51	+1.1
3,855,479	+		EFB2_03687	0.51	+0.9
3,855,479	+		EFB2_03687	0.51	+0.7
3,855,479	+		EFB2_03687	0.51	-0.9
3,855,479	+		EFB2_03687	0.51	-0.5
3,855,479	+		EFB2_03687	0.51	+0.3
3,855,479	+		EFB2_03687	0.51	-1.1
3,855,480	-		EFB2_03687	0.51	+0.4
3,855,553	+		EFB2_03687	0.61	+0.9
3,855,553	+		EFB2_03687	0.61	-0.3
3,855,553	+		EFB2_03687	0.61	+0.6
3,855,554	-		EFB2_03687	0.61	+0.9
3,855,554	-		EFB2_03687	0.61	-0.8
3,855,592	+		EFB2_03687	0.66	-0.1
3,855,592	+		EFB2_03687	0.66	-1.2
3,855,593	-		EFB2_03687	0.66	+0.3
3,855,593	-		EFB2_03687	0.66	+0.2
3,855,608	-		EFB2_03687	0.68	+1.6
3,855,608	-		EFB2_03687	0.68	-0.7
3,855,631	+		EFB2_03687	0.71	-0.3
3,855,695	+		EFB2_03687	0.79	+0.3
3,855,729	+		EFB2_03687	0.84	-0.0
3,855,729	+		EFB2_03687	0.84	+0.2
3,855,730	-		EFB2_03687	0.84	+0.3
3,855,730	-		EFB2_03687	0.84	+0.7
3,855,730	-		EFB2_03687	0.84	-0.1
3,855,730	-		EFB2_03687	0.84	+1.4
3,855,730	-		EFB2_03687	0.84	-0.2
3,855,760	+		EFB2_03687	0.88	-1.7
3,855,761	-		EFB2_03687	0.88	+0.1
3,855,796	-				+0.3
3,855,796	-				-0.4
3,855,821	+				+0.9
3,855,821	+				-1.6
3,855,830	+				+0.5
3,855,831	-				-0.7
3,855,866	+				-3.6
3,855,866	+				+1.6
3,855,866	+				+1.3
3,855,866	+				-0.1
3,855,866	+				-0.9
3,855,866	+				+0.2
3,855,866	+				-1.9
3,855,867	-				-0.1
3,855,867	-				-0.1
3,855,867	-				+0.3
3,855,885	+				-0.3
3,855,886	-				+0.2
3,855,886	-				+0.1
3,855,886	-				+2.1
3,855,890	+				-1.2
3,855,890	+				-1.5
3,855,890	+				+0.1
3,855,890	+				+0.0
3,855,890	+				+1.3
3,855,891	-				-0.2
3,855,891	-				+0.4
3,855,899	+				+0.1
3,855,899	+				+1.1
3,855,900	-				-1.6
3,855,900	-				+0.1
3,856,013	+		EFB2_03688	0.15	-0.5
3,856,013	+		EFB2_03688	0.15	-1.2
3,856,013	+		EFB2_03688	0.15	+0.8
3,856,013	+		EFB2_03688	0.15	-0.1
3,856,014	-		EFB2_03688	0.15	+1.1
3,856,017	+		EFB2_03688	0.16	-0.6
3,856,017	+		EFB2_03688	0.16	-2.4
3,856,017	+		EFB2_03688	0.16	+0.3
3,856,017	+		EFB2_03688	0.16	+0.1
3,856,017	+		EFB2_03688	0.16	-0.9
3,856,017	+		EFB2_03688	0.16	-0.1
3,856,017	+		EFB2_03688	0.16	-0.2
3,856,017	+		EFB2_03688	0.16	-0.6
3,856,018	-		EFB2_03688	0.16	+2.5
3,856,018	-		EFB2_03688	0.16	+0.9
3,856,018	-		EFB2_03688	0.16	-0.4
3,856,018	-		EFB2_03688	0.16	-0.3
3,856,018	-		EFB2_03688	0.16	-1.4
3,856,018	-		EFB2_03688	0.16	-0.9
3,856,018	-		EFB2_03688	0.16	+1.3
3,856,018	-		EFB2_03688	0.16	+1.1
3,856,018	-		EFB2_03688	0.16	+1.8
3,856,018	-		EFB2_03688	0.16	-0.9
3,856,018	-		EFB2_03688	0.16	-1.0
3,856,018	-		EFB2_03688	0.16	-0.5
3,856,018	-		EFB2_03688	0.16	-1.4
3,856,018	-		EFB2_03688	0.16	-0.0
3,856,018	-		EFB2_03688	0.16	-0.1
3,856,018	-		EFB2_03688	0.16	-1.3
3,856,018	-		EFB2_03688	0.16	-0.2
3,856,018	-		EFB2_03688	0.16	+0.0
3,856,018	-		EFB2_03688	0.16	-0.3
3,856,018	-		EFB2_03688	0.16	+0.3
3,856,117	-		EFB2_03688	0.26	+0.3
3,856,124	+		EFB2_03688	0.27	+0.7
3,856,124	+		EFB2_03688	0.27	-3.3
3,856,124	+		EFB2_03688	0.27	+0.4
3,856,124	+		EFB2_03688	0.27	+0.7
3,856,124	+		EFB2_03688	0.27	-1.3
3,856,124	+		EFB2_03688	0.27	+0.6
3,856,124	+		EFB2_03688	0.27	+0.7
3,856,124	+		EFB2_03688	0.27	+0.3
3,856,125	-		EFB2_03688	0.27	-0.1
3,856,125	-		EFB2_03688	0.27	-0.5
3,856,125	-		EFB2_03688	0.27	-2.1
3,856,125	-		EFB2_03688	0.27	+0.1
3,856,125	-		EFB2_03688	0.27	-1.5
3,856,125	-		EFB2_03688	0.27	+0.1
3,856,125	-		EFB2_03688	0.27	+0.5
3,856,307	+		EFB2_03688	0.46	+0.5
3,856,307	+		EFB2_03688	0.46	+0.1
3,856,307	+		EFB2_03688	0.46	-0.5
3,856,307	+		EFB2_03688	0.46	-0.1
3,856,307	+		EFB2_03688	0.46	-0.5
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