Strain Fitness in Escherichia fergusonii Becca around EFB2_03356

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
3,511,521	+		EFB2_03354	0.77	-0.4
3,511,521	+		EFB2_03354	0.77	-0.7
3,511,521	+		EFB2_03354	0.77	+0.4
3,511,521	+		EFB2_03354	0.77	+1.2
3,511,521	+		EFB2_03354	0.77	-0.3
3,511,521	+		EFB2_03354	0.77	-0.2
3,511,521	+		EFB2_03354	0.77	+0.2
3,511,521	+		EFB2_03354	0.77	+1.0
3,511,521	+		EFB2_03354	0.77	+0.7
3,511,521	+		EFB2_03354	0.77	-0.9
3,511,521	+		EFB2_03354	0.77	+0.2
3,511,521	+		EFB2_03354	0.77	+0.2
3,511,521	+		EFB2_03354	0.77	-1.7
3,511,521	+		EFB2_03354	0.77	-0.2
3,511,521	+		EFB2_03354	0.77	-0.6
3,511,521	+		EFB2_03354	0.77	+0.2
3,511,521	+		EFB2_03354	0.77	+0.0
3,511,521	+		EFB2_03354	0.77	-0.2
3,511,521	+		EFB2_03354	0.77	+0.5
3,511,521	+		EFB2_03354	0.77	-2.7
3,511,521	+		EFB2_03354	0.77	+0.0
3,511,521	+		EFB2_03354	0.77	-1.0
3,511,521	+		EFB2_03354	0.77	-0.6
3,511,521	+		EFB2_03354	0.77	+0.1
3,511,522	-		EFB2_03354	0.78	-0.2
3,511,522	-		EFB2_03354	0.78	-1.2
3,511,522	-		EFB2_03354	0.78	-2.9
3,511,522	-		EFB2_03354	0.78	+1.3
3,511,522	-		EFB2_03354	0.78	+1.2
3,511,522	-		EFB2_03354	0.78	-0.1
3,511,522	-		EFB2_03354	0.78	+1.0
3,511,522	-		EFB2_03354	0.78	+0.0
3,511,522	-		EFB2_03354	0.78	-1.1
3,511,522	-		EFB2_03354	0.78	+1.0
3,511,522	-		EFB2_03354	0.78	-0.0
3,511,522	-		EFB2_03354	0.78	-2.1
3,511,522	-		EFB2_03354	0.78	-1.2
3,511,522	-		EFB2_03354	0.78	-1.2
3,511,522	-		EFB2_03354	0.78	-0.4
3,511,522	-		EFB2_03354	0.78	-1.5
3,511,522	-		EFB2_03354	0.78	-1.4
3,511,522	-		EFB2_03354	0.78	+0.4
3,511,522	-		EFB2_03354	0.78	+0.6
3,511,522	-		EFB2_03354	0.78	-0.4
3,511,522	-		EFB2_03354	0.78	-1.9
3,511,522	-		EFB2_03354	0.78	+0.7
3,511,522	-		EFB2_03354	0.78	+2.1
3,511,522	-		EFB2_03354	0.78	-0.0
3,511,522	-		EFB2_03354	0.78	-0.6
3,511,522	-		EFB2_03354	0.78	+2.0
3,511,522	-		EFB2_03354	0.78	+1.0
3,511,522	-		EFB2_03354	0.78	-1.0
3,511,522	-		EFB2_03354	0.78	-1.6
3,511,522	-		EFB2_03354	0.78	+0.9
3,511,522	-		EFB2_03354	0.78	-0.4
3,511,596	+		EFB2_03354	0.85	+0.0
3,511,596	+		EFB2_03354	0.85	-0.1
3,511,596	+		EFB2_03354	0.85	+0.7
3,511,596	+		EFB2_03354	0.85	+1.1
3,511,596	+		EFB2_03354	0.85	+0.4
3,511,596	+		EFB2_03354	0.85	+0.2
3,511,596	+		EFB2_03354	0.85	+0.4
3,511,597	-		EFB2_03354	0.86	-0.0
3,511,597	-		EFB2_03354	0.86	+0.9
3,511,597	-		EFB2_03354	0.86	+0.4
3,511,597	-		EFB2_03354	0.86	+0.7
3,511,597	-		EFB2_03354	0.86	+0.6
3,511,597	-		EFB2_03354	0.86	-0.1
3,511,613	+		EFB2_03354	0.87	-0.6
3,511,613	+		EFB2_03354	0.87	+0.4
3,511,613	+		EFB2_03354	0.87	-3.0
3,511,613	+		EFB2_03354	0.87	+1.2
3,511,613	+		EFB2_03354	0.87	-0.3
3,511,613	+		EFB2_03354	0.87	+0.7
3,511,613	+		EFB2_03354	0.87	-1.2
3,511,613	+		EFB2_03354	0.87	+1.3
3,511,613	+		EFB2_03354	0.87	+1.2
3,511,613	+		EFB2_03354	0.87	-0.0
3,511,613	+		EFB2_03354	0.87	-1.4
3,511,613	+		EFB2_03354	0.87	+0.1
3,511,614	-		EFB2_03354	0.87	-0.1
3,511,614	-		EFB2_03354	0.87	+1.1
3,511,614	-		EFB2_03354	0.87	+0.6
3,511,614	-		EFB2_03354	0.87	+1.0
3,511,614	-		EFB2_03354	0.87	-0.9
3,511,614	-		EFB2_03354	0.87	-0.6
3,511,628	+		EFB2_03354	0.89	+0.0
3,511,629	-		EFB2_03354	0.89	+0.6
3,511,648	+				-0.1
3,511,649	-				-2.0
3,511,649	-				-1.1
3,511,661	+				-1.0
3,511,661	+				-2.3
3,511,661	+				-0.7
3,511,661	+				-0.4
3,511,661	+				-0.7
3,511,662	-				-2.2
3,511,662	-				+3.0
3,511,800	+				+0.1
3,511,800	+				+0.4
3,511,800	+				-2.1
3,511,801	-		EFB2_03355	0.10	+0.2
3,511,801	-		EFB2_03355	0.10	+0.1
3,511,801	-		EFB2_03355	0.10	+0.5
3,511,801	-		EFB2_03355	0.10	+0.2
3,511,817	+		EFB2_03355	0.12	-1.2
3,511,817	+		EFB2_03355	0.12	+1.6
3,511,817	+		EFB2_03355	0.12	+0.4
3,511,818	-		EFB2_03355	0.12	+1.2
3,511,818	-		EFB2_03355	0.12	-3.1
3,511,835	+		EFB2_03355	0.15	+1.0
3,511,836	-		EFB2_03355	0.15	+0.3
3,511,866	+		EFB2_03355	0.19	-2.0
3,511,866	+		EFB2_03355	0.19	-0.8
3,511,867	-		EFB2_03355	0.19	+1.2
3,511,867	-		EFB2_03355	0.19	+0.4
3,511,875	+		EFB2_03355	0.20	+0.2
3,511,878	+		EFB2_03355	0.21	-1.7
3,511,879	-		EFB2_03355	0.21	-1.0
3,511,879	-		EFB2_03355	0.21	+0.0
3,511,879	-		EFB2_03355	0.21	-0.8
3,511,879	-		EFB2_03355	0.21	-1.1
3,511,879	-		EFB2_03355	0.21	+0.4
3,511,907	+		EFB2_03355	0.25	+0.9
3,511,907	+		EFB2_03355	0.25	-1.0
3,511,907	+		EFB2_03355	0.25	-0.8
3,511,908	-		EFB2_03355	0.25	+1.4
3,511,908	-		EFB2_03355	0.25	-0.8
3,511,908	-		EFB2_03355	0.25	-0.1
3,511,908	-		EFB2_03355	0.25	-0.7
3,511,908	-		EFB2_03355	0.25	-0.6
3,511,911	+		EFB2_03355	0.25	-2.0
3,511,911	+		EFB2_03355	0.25	+0.9
3,511,911	+		EFB2_03355	0.25	+1.0
3,511,911	+		EFB2_03355	0.25	-1.4
3,511,911	+		EFB2_03355	0.25	+2.7
3,511,911	+		EFB2_03355	0.25	+0.7
3,511,912	-		EFB2_03355	0.25	-0.8
3,511,912	-		EFB2_03355	0.25	-1.4
3,511,912	-		EFB2_03355	0.25	+0.3
3,511,912	-		EFB2_03355	0.25	-0.5
3,511,912	-		EFB2_03355	0.25	-1.0
3,511,912	-		EFB2_03355	0.25	+0.5
3,511,912	-		EFB2_03355	0.25	+1.0
3,511,912	-		EFB2_03355	0.25	-0.1
3,511,938	+		EFB2_03355	0.29	-0.6
3,511,938	+		EFB2_03355	0.29	-0.6
3,511,939	-		EFB2_03355	0.29	+1.3
3,511,939	-		EFB2_03355	0.29	-0.4
3,511,942	+		EFB2_03355	0.30	-0.8
3,511,942	+		EFB2_03355	0.30	-1.0
3,511,942	+		EFB2_03355	0.30	-0.0
3,511,942	+		EFB2_03355	0.30	-1.3
3,511,942	+		EFB2_03355	0.30	-0.6
3,511,942	+		EFB2_03355	0.30	+0.7
3,511,942	+		EFB2_03355	0.30	-0.4
3,511,943	-		EFB2_03355	0.30	-0.2
3,511,943	-		EFB2_03355	0.30	-0.1
3,511,943	-		EFB2_03355	0.30	+0.3
3,511,943	-		EFB2_03355	0.30	-2.4
3,511,943	-		EFB2_03355	0.30	+0.2
3,511,943	-		EFB2_03355	0.30	+0.9
3,511,943	-		EFB2_03355	0.30	+0.0
3,511,943	-		EFB2_03355	0.30	-0.8
3,511,943	-		EFB2_03355	0.30	+1.3
3,511,943	-		EFB2_03355	0.30	-0.7
3,511,943	-		EFB2_03355	0.30	-1.2
3,511,987	+		EFB2_03355	0.36	+1.4
3,511,987	+		EFB2_03355	0.36	-1.7
3,511,988	-		EFB2_03355	0.36	-2.1
3,511,988	-		EFB2_03355	0.36	+0.0
3,511,988	-		EFB2_03355	0.36	+1.0
3,511,988	-		EFB2_03355	0.36	+0.4
3,512,008	+		EFB2_03355	0.39	+0.4
3,512,008	+		EFB2_03355	0.39	+0.5
3,512,014	+		EFB2_03355	0.40	+0.4
3,512,014	+		EFB2_03355	0.40	+2.2
3,512,015	-		EFB2_03355	0.40	+0.8
3,512,070	+		EFB2_03355	0.47	+0.0
3,512,071	-		EFB2_03355	0.47	-1.4
3,512,071	-		EFB2_03355	0.47	+0.4
3,512,071	-		EFB2_03355	0.47	+3.0
3,512,071	-		EFB2_03355	0.47	+0.1
3,512,071	-		EFB2_03355	0.47	-0.1
3,512,074	+		EFB2_03355	0.48	+1.3
3,512,074	+		EFB2_03355	0.48	-0.1
3,512,074	+		EFB2_03355	0.48	-0.1
3,512,075	-		EFB2_03355	0.48	-0.9
3,512,075	-		EFB2_03355	0.48	+1.9
3,512,075	-		EFB2_03355	0.48	+0.6
3,512,075	-		EFB2_03355	0.48	-0.0
3,512,075	-		EFB2_03355	0.48	+0.7
3,512,075	-		EFB2_03355	0.48	-0.0
3,512,075	-		EFB2_03355	0.48	-1.6
3,512,192	+		EFB2_03355	0.64	+1.4
3,512,193	-		EFB2_03355	0.64	+1.5
3,512,201	+		EFB2_03355	0.66	-2.6
3,512,202	-		EFB2_03355	0.66	-1.1
3,512,202	-		EFB2_03355	0.66	-1.1
3,512,202	-		EFB2_03355	0.66	-0.6
3,512,230	+		EFB2_03355	0.70	-0.8
3,512,230	+		EFB2_03355	0.70	+0.3
3,512,231	-		EFB2_03355	0.70	-1.6
3,512,231	-		EFB2_03355	0.70	+1.9
3,512,233	+		EFB2_03355	0.70	-0.1
3,512,233	+		EFB2_03355	0.70	+1.1
3,512,233	+		EFB2_03355	0.70	-0.7
3,512,234	-		EFB2_03355	0.70	-0.8
3,512,234	-		EFB2_03355	0.70	-1.1
3,512,234	-		EFB2_03355	0.70	-0.2
3,512,234	-		EFB2_03355	0.70	-1.0
3,512,234	-		EFB2_03355	0.70	-1.9
3,512,234	-		EFB2_03355	0.70	+0.3
3,512,234	-		EFB2_03355	0.70	-0.5
3,512,234	-		EFB2_03355	0.70	+1.0
3,512,246	+		EFB2_03355	0.72	+1.0
3,512,246	+		EFB2_03355	0.72	+1.3
3,512,246	+		EFB2_03355	0.72	-0.9
3,512,246	+		EFB2_03355	0.72	+0.7
3,512,247	-		EFB2_03355	0.72	-1.7
3,512,247	-		EFB2_03355	0.72	+1.7
3,512,247	-		EFB2_03355	0.72	-0.4
3,512,247	-		EFB2_03355	0.72	+1.8
3,512,268	+		EFB2_03355	0.75	+0.8
3,512,269	-		EFB2_03355	0.75	+1.4
3,512,306	+		EFB2_03355	0.80	-1.0
3,512,306	+		EFB2_03355	0.80	+2.0
3,512,307	-		EFB2_03355	0.80	-1.1
3,512,307	-		EFB2_03355	0.80	+0.5
3,512,307	-		EFB2_03355	0.80	+0.4
3,512,307	-		EFB2_03355	0.80	+0.9
3,512,310	+		EFB2_03355	0.81	+0.4
3,512,310	+		EFB2_03355	0.81	-1.4
3,512,310	+		EFB2_03355	0.81	+0.2
3,512,310	+		EFB2_03355	0.81	-0.6
3,512,310	+		EFB2_03355	0.81	+0.1
3,512,310	+		EFB2_03355	0.81	-1.6
3,512,310	+		EFB2_03355	0.81	+0.8
3,512,310	+		EFB2_03355	0.81	+1.7
3,512,310	+		EFB2_03355	0.81	+1.9
3,512,310	+		EFB2_03355	0.81	-0.4
3,512,311	-		EFB2_03355	0.81	+0.1
3,512,311	-		EFB2_03355	0.81	+0.9
3,512,311	-		EFB2_03355	0.81	+0.4
3,512,311	-		EFB2_03355	0.81	-2.6
3,512,340	+		EFB2_03355	0.85	-1.3
3,512,390	+				+1.0
3,512,404	+				+0.4
3,512,410	+				+1.0
3,512,410	+				-0.0
3,512,410	+				-1.4
3,512,410	+				-0.0
3,512,410	+				-0.8
3,512,410	+				-1.1
3,512,410	+				-1.6
3,512,410	+				+0.3
3,512,410	+				+0.4
3,512,410	+				+0.6
3,512,410	+				+0.7
3,512,410	+				-0.2
3,512,410	+				-1.7
3,512,410	+				-0.3
3,512,410	+				-0.6
3,512,410	+				-0.9
3,512,410	+				+0.4
3,512,410	+				+4.8
3,512,410	+				-1.2
3,512,410	+				+2.8
3,512,410	+				+0.9
3,512,410	+				-0.2
3,512,410	+				+1.4
3,512,410	+				-1.0
3,512,410	+				+0.6
3,512,410	+				+0.3
3,512,410	+				+0.6
3,512,410	+				-0.4
3,512,410	+				-0.2
3,512,411	-				+0.4
3,512,411	-				-0.8
3,512,411	-				-0.1
3,512,411	-				+0.6
3,512,411	-				-0.3
3,512,411	-				-0.2
3,512,411	-				-0.5
3,512,411	-				-1.0
3,512,411	-				+0.0
3,512,411	-				-2.0
3,512,411	-				-2.7
3,512,411	-				+0.3
3,512,411	-				+3.4
3,512,411	-				-0.3
3,512,411	-				+0.3
3,512,411	-				+1.9
3,512,411	-				+0.2
3,512,411	-				-1.6
3,512,411	-				+0.2
3,512,411	-				-2.1
3,512,411	-				-0.1
3,512,411	-				-0.6
3,512,411	-				+2.4
3,512,411	-				-0.3
3,512,411	-				-1.1
3,512,411	-				-0.9
3,512,411	-				-0.1
3,512,411	-				+0.2
3,512,411	-				+0.2
3,512,411	-				+0.2
3,512,411	-				+0.6
3,512,411	-				+0.9
3,512,411	-				+0.1
3,512,411	-				-3.2
3,512,411	-				+0.9
3,512,411	-				+0.2
3,512,412	+				+1.0
3,512,412	+				+0.7
3,512,412	+				+0.3
3,512,412	+				-1.5
3,512,412	+				+1.7
3,512,412	+				-0.4
3,512,412	+				+1.6
3,512,412	+				+0.4
3,512,412	+				+0.1
3,512,412	+				-0.6
3,512,412	+				-1.8
3,512,412	+				+0.4
3,512,412	+				-0.5
3,512,412	+				+2.0
3,512,412	+				-0.3
3,512,412	+				-1.0
3,512,412	+				-0.1
3,512,412	+				-0.4
3,512,412	+				-0.8
3,512,412	+				+0.5
3,512,412	+				+0.0
3,512,412	+				+0.6
3,512,412	+				-0.2
3,512,412	+				+0.2
3,512,412	+				+2.8
3,512,412	+				-0.2
3,512,412	+				+0.5
3,512,412	+				-0.3
3,512,412	+				+0.2
3,512,412	+				-2.9
3,512,412	+				+1.0
3,512,412	+				-1.0
3,512,412	+				+0.0
3,512,412	+				-0.5
3,512,412	+				-1.1
3,512,413	-				-0.1
3,512,413	-				+1.1
3,512,413	-				+0.8
3,512,413	-				-1.4
3,512,413	-				+1.3
3,512,413	-				-0.7
3,512,413	-				+1.2
3,512,413	-				+0.2
3,512,413	-				+0.3
3,512,413	-				+0.1
3,512,413	-				-0.6
3,512,413	-				-0.1
3,512,413	-				-0.8
3,512,413	-				-1.4
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3,514,424	-				-0.1
3,514,424	-				-1.6
3,514,424	-				+2.0
3,514,424	-				+0.0
3,514,424	-				-1.5
3,514,424	-				-1.0
3,514,424	-				-0.4
3,514,424	-				+0.6
3,514,424	-				-1.1
3,514,428	-				+1.0
3,514,428	-				-0.8
3,514,428	-				-1.1
3,514,428	-				+0.5
3,514,428	-				-0.7
3,514,428	-				-0.7
3,514,428	-				-0.1
3,514,428	-				-0.8
3,514,428	-				-0.1
3,514,428	-				-1.0
3,514,428	-				+0.1
3,514,428	-				-1.2
3,514,428	-				+1.0
3,514,428	-				+1.2
3,514,428	-				+0.0
3,514,428	-				+1.3
3,514,428	-				-0.8
3,514,428	-				-0.7
3,514,428	-				-3.3
3,514,428	-				-1.3
3,514,428	-				-2.8
3,514,428	-				+1.0
3,514,428	-				-0.3
3,514,428	-				+0.0
3,514,428	-				+1.4
3,514,428	-				-0.2
3,514,428	-				+0.4
3,514,428	-				+0.1
3,514,428	-				-0.0
3,514,428	-				-0.6
3,514,428	-				-0.8
3,514,428	-				-1.1
3,514,428	-				-2.4
3,514,433	-				+0.0