Strain Fitness in Escherichia fergusonii Becca around EFB2_02197

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
2,332,770	+		EFB2_02196	0.66	+2.8
2,332,770	+		EFB2_02196	0.66	+1.4
2,332,770	+		EFB2_02196	0.66	-1.2
2,332,770	+		EFB2_02196	0.66	-1.2
2,332,771	-		EFB2_02196	0.66	-0.4
2,332,771	-		EFB2_02196	0.66	+1.5
2,332,771	-		EFB2_02196	0.66	-1.5
2,332,771	-		EFB2_02196	0.66	-0.6
2,332,771	-		EFB2_02196	0.66	-0.6
2,332,772	+		EFB2_02196	0.66	+1.2
2,332,772	+		EFB2_02196	0.66	+0.5
2,332,772	+		EFB2_02196	0.66	-0.9
2,332,773	-		EFB2_02196	0.66	+0.2
2,332,773	-		EFB2_02196	0.66	-0.0
2,332,773	-		EFB2_02196	0.66	+0.6
2,332,773	-		EFB2_02196	0.66	+0.3
2,332,839	-		EFB2_02196	0.72	+1.2
2,332,907	+		EFB2_02196	0.78	-0.4
2,332,935	-		EFB2_02196	0.81	+0.3
2,332,935	-		EFB2_02196	0.81	-0.1
2,332,935	-		EFB2_02196	0.81	+0.9
2,332,953	-		EFB2_02196	0.82	-2.0
2,332,964	+		EFB2_02196	0.83	-1.4
2,332,965	-		EFB2_02196	0.83	-1.8
2,332,965	-		EFB2_02196	0.83	-1.1
2,333,119	+				+0.2
2,333,119	+				-1.8
2,333,128	+				-0.4
2,333,148	+				+0.6
2,333,149	-				+0.2
2,333,149	-				+0.2
2,333,199	-				+0.0
2,333,199	-				+0.8
2,333,199	-				-0.9
2,333,231	+				-1.3
2,333,231	+				-0.4
2,333,231	+				-1.0
2,333,232	-				+0.2
2,333,232	-				-0.0
2,333,232	-				+0.0
2,333,232	-				-1.4
2,333,232	-				+0.1
2,333,273	-				+0.4
2,333,273	-				+0.6
2,333,273	-				-0.9
2,333,276	+				+1.4
2,333,318	+				+0.6
2,333,318	+				-0.1
2,333,318	+				-0.9
2,333,318	+				+0.3
2,333,319	-				+0.2
2,333,319	-				+0.8
2,333,319	-				+3.2
2,333,319	-				+0.4
2,333,319	-				+0.8
2,333,319	-				+0.5
2,333,370	+				+2.6
2,333,412	+				-0.7
2,333,413	-				-0.0
2,333,415	+				-0.6
2,333,415	+				+0.9
2,333,415	+				+2.2
2,333,435	+				+0.7
2,333,436	-				-1.1
2,333,462	+				+2.2
2,333,463	-				-0.3
2,333,506	-				+0.8
2,333,558	+				+1.8
2,333,558	+				+0.2
2,333,558	+				-1.5
2,333,559	-				+2.6
2,333,559	-				+0.3
2,333,559	-				-0.8
2,333,621	+				-0.2
2,333,621	+				-0.0
2,333,621	+				-0.3
2,333,622	-				-1.3
2,333,622	-				+1.2
2,333,645	+				-0.3
2,333,677	-				+0.8
2,333,677	-				-1.0
2,333,680	+				+0.4
2,333,689	+				+0.7
2,333,689	+				+0.2
2,333,720	+				+0.4
2,333,721	-				+0.2
2,333,729	+				+1.5
2,333,749	+				+0.3
2,333,794	+		EFB2_02197	0.16	+1.2
2,333,809	+		EFB2_02197	0.18	+1.0
2,333,845	+		EFB2_02197	0.24	+0.5
2,333,859	+		EFB2_02197	0.26	+0.4
2,333,895	+		EFB2_02197	0.32	+0.6
2,333,916	+		EFB2_02197	0.35	+0.1
2,333,928	+		EFB2_02197	0.37	+0.4
2,333,928	+		EFB2_02197	0.37	-0.1
2,333,928	+		EFB2_02197	0.37	+0.6
2,333,928	+		EFB2_02197	0.37	+0.2
2,333,928	+		EFB2_02197	0.37	-2.7
2,333,928	+		EFB2_02197	0.37	-1.0
2,333,928	+		EFB2_02197	0.37	+1.0
2,333,928	+		EFB2_02197	0.37	+0.4
2,333,928	+		EFB2_02197	0.37	-0.2
2,333,933	+		EFB2_02197	0.38	+0.7
2,333,968	+		EFB2_02197	0.43	+0.6
2,334,054	+		EFB2_02197	0.56	+2.2
2,334,070	+		EFB2_02197	0.59	+1.2
2,334,092	+		EFB2_02197	0.62	-0.1
2,334,092	+		EFB2_02197	0.62	+0.9
2,334,092	+		EFB2_02197	0.62	+0.7
2,334,092	+		EFB2_02197	0.62	-0.4
2,334,092	+		EFB2_02197	0.62	+0.6
2,334,092	+		EFB2_02197	0.62	-0.5
2,334,092	+		EFB2_02197	0.62	-0.3
2,334,093	-		EFB2_02197	0.63	+1.3
2,334,093	-		EFB2_02197	0.63	+3.0
2,334,124	+		EFB2_02197	0.67	+0.2
2,334,124	+		EFB2_02197	0.67	-0.5
2,334,125	-		EFB2_02197	0.68	+1.6
2,334,136	+		EFB2_02197	0.69	+1.1
2,334,154	+		EFB2_02197	0.72	+0.0
2,334,233	+		EFB2_02197	0.85	+0.2
2,334,234	-		EFB2_02197	0.85	-1.4
2,334,234	-		EFB2_02197	0.85	+0.6
2,334,237	+		EFB2_02197	0.85	+1.1
2,334,237	+		EFB2_02197	0.85	+0.0
2,334,237	+		EFB2_02197	0.85	+0.2
2,334,237	+		EFB2_02197	0.85	-1.4
2,334,237	+		EFB2_02197	0.85	-0.4
2,334,237	+		EFB2_02197	0.85	+0.6
2,334,237	+		EFB2_02197	0.85	+0.5
2,334,237	+		EFB2_02197	0.85	+0.5
2,334,237	+		EFB2_02197	0.85	+0.9
2,334,237	+		EFB2_02197	0.85	-0.2
2,334,237	+		EFB2_02197	0.85	+0.4
2,334,237	+		EFB2_02197	0.85	-1.5
2,334,237	+		EFB2_02197	0.85	+1.0
2,334,237	+		EFB2_02197	0.85	+0.4
2,334,237	+		EFB2_02197	0.85	+0.7
2,334,237	+		EFB2_02197	0.85	-0.9
2,334,237	+		EFB2_02197	0.85	+1.3
2,334,237	+		EFB2_02197	0.85	+2.4
2,334,237	+		EFB2_02197	0.85	+3.2
2,334,237	+		EFB2_02197	0.85	+0.1
2,334,237	+		EFB2_02197	0.85	-1.3
2,334,237	+		EFB2_02197	0.85	-0.6
2,334,237	+		EFB2_02197	0.85	+0.3
2,334,237	+		EFB2_02197	0.85	-0.8
2,334,237	+		EFB2_02197	0.85	-3.2
2,334,237	+		EFB2_02197	0.85	+1.7
2,334,237	+		EFB2_02197	0.85	+3.8
2,334,237	+		EFB2_02197	0.85	+0.8
2,334,237	+		EFB2_02197	0.85	+0.2
2,334,237	+		EFB2_02197	0.85	-1.0
2,334,237	+		EFB2_02197	0.85	-0.4
2,334,237	+		EFB2_02197	0.85	+1.2
2,334,237	+		EFB2_02197	0.85	-1.1
2,334,237	+		EFB2_02197	0.85	-0.6
2,334,237	+		EFB2_02197	0.85	-1.1
2,334,237	+		EFB2_02197	0.85	+1.9
2,334,237	+		EFB2_02197	0.85	+0.2
2,334,237	+		EFB2_02197	0.85	-0.7
2,334,237	+		EFB2_02197	0.85	+0.2
2,334,237	+		EFB2_02197	0.85	+0.3
2,334,237	+		EFB2_02197	0.85	+0.3
2,334,237	+		EFB2_02197	0.85	+0.0
2,334,237	+		EFB2_02197	0.85	+1.6
2,334,237	+		EFB2_02197	0.85	-0.7
2,334,237	+		EFB2_02197	0.85	-1.3
2,334,237	+		EFB2_02197	0.85	+1.1
2,334,237	+		EFB2_02197	0.85	+0.8
2,334,237	+		EFB2_02197	0.85	-0.6
2,334,237	+		EFB2_02197	0.85	+0.9
2,334,237	+		EFB2_02197	0.85	-0.6
2,334,237	+		EFB2_02197	0.85	+0.0
2,334,237	+		EFB2_02197	0.85	-2.5
2,334,237	+		EFB2_02197	0.85	+0.4
2,334,237	+		EFB2_02197	0.85	+2.2
2,334,237	+		EFB2_02197	0.85	-1.1
2,334,237	+		EFB2_02197	0.85	+1.4
2,334,238	-		EFB2_02197	0.85	-0.6
2,334,238	-		EFB2_02197	0.85	+0.3
2,334,238	-		EFB2_02197	0.85	+0.4
2,334,238	-		EFB2_02197	0.85	-0.1
2,334,238	-		EFB2_02197	0.85	-1.3
2,334,238	-		EFB2_02197	0.85	+2.2
2,334,238	-		EFB2_02197	0.85	-1.2
2,334,241	+		EFB2_02197	0.86	-1.0
2,334,241	+		EFB2_02197	0.86	+0.6
2,334,368	+				-1.4
2,334,426	-				+0.1
2,334,465	+				+0.6
2,334,466	-				+0.1
2,334,525	+				-1.3
2,334,526	-				-0.6
2,334,526	-				+1.4
2,334,528	-				+0.6
2,334,533	+				+1.2
2,334,534	-				+2.2
2,334,534	-				+0.6
2,334,558	-		EFB2_02198	0.15	-1.7
2,334,600	-		EFB2_02198	0.27	-0.0
2,334,658	-		EFB2_02198	0.43	-0.8
2,334,667	-		EFB2_02198	0.45	-0.1
2,334,776	+		EFB2_02198	0.76	+0.2
2,334,776	+		EFB2_02198	0.76	-0.3
2,334,776	+		EFB2_02198	0.76	+0.4
2,334,780	+		EFB2_02198	0.77	+1.4
2,334,780	+		EFB2_02198	0.77	-0.6
2,334,780	+		EFB2_02198	0.77	-1.3
2,334,780	+		EFB2_02198	0.77	-0.8
2,334,781	-		EFB2_02198	0.77	-0.0
2,334,781	-		EFB2_02198	0.77	+0.2
2,334,781	-		EFB2_02198	0.77	-1.0
2,334,781	-		EFB2_02198	0.77	-0.1
2,334,781	-		EFB2_02198	0.77	+0.6
2,334,882	+				+1.2
2,334,882	+				-0.8
2,334,882	+				+0.2
2,334,882	+				-0.6
2,334,882	+				+0.4
2,334,882	+				-1.3
2,334,882	+				+0.2
2,334,882	+				-0.3
2,334,882	+				-1.6
2,334,883	-				-1.6
2,334,883	-				-2.6
2,334,883	-				+0.3
2,334,883	-				+1.2
2,334,883	-				-0.6
2,334,883	-				+0.3
2,334,883	-				-0.4
2,334,883	-				-0.6
2,334,883	-				+1.0
2,334,883	-				-1.5
2,334,883	-				+0.3
2,334,883	-				-0.1
2,334,883	-				-1.1
2,334,883	-				-0.8
2,334,883	-				-0.1
2,334,884	+				+0.0
2,334,927	+		EFB2_02199	0.33	-1.1
2,334,982	+		EFB2_02199	0.63	+1.5
2,334,982	+		EFB2_02199	0.63	+1.0
2,334,998	+		EFB2_02199	0.72	-0.4
2,335,011	+		EFB2_02199	0.79	-0.2
2,335,011	+		EFB2_02199	0.79	+1.2
2,335,012	-		EFB2_02199	0.79	+1.2
2,335,047	+				+1.6
2,335,047	+				-0.6
2,335,047	+				-0.5
2,335,047	+				-0.1
2,335,051	+				-0.5
2,335,051	+				-0.1
2,335,051	+				+0.5
2,335,052	-				+0.9
2,335,052	-				-0.1
2,335,142	+				+1.3
2,335,142	+				+1.1
2,335,143	-				+2.0
2,335,143	-				+0.3
2,335,183	+				+0.1
2,335,183	+				+0.5
2,335,183	+				-0.6
2,335,184	-				-0.1
2,335,184	-				+0.5
2,335,184	-				-1.7
2,335,184	-				-2.1
2,335,184	-				-1.5
2,335,184	-				+0.6
2,335,184	-				+1.6
2,335,184	-				-0.6
2,335,217	+				+0.2
2,335,218	-				+1.5
2,335,230	-		EFB2_02200	0.13	-1.6
2,335,238	+		EFB2_02200	0.16	-1.2
2,335,286	+		EFB2_02200	0.36	-1.2
2,335,287	-		EFB2_02200	0.36	+1.6
2,335,292	+		EFB2_02200	0.38	-0.6