Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05197

Experiment: Galactomannan from guar 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05196 and BACOVA_05197 overlap by 14 nucleotidesBACOVA_05197 and BACOVA_05198 are separated by 58 nucleotides BACOVA_05196: BACOVA_05196 - pantothenate kinase, type III, at 695,367 to 696,155 _05196 BACOVA_05197: BACOVA_05197 - outer membrane protein transport protein, Ompp1/FadL/TodX family, at 696,142 to 697,413 _05197 BACOVA_05198: BACOVA_05198 - tetratricopeptide repeat protein, at 697,472 to 698,797 _05198 Position (kb) 696 697 698Strain fitness (log2 ratio) -2 -1 0 1at 695.219 kb on + strandat 695.227 kb on + strandat 695.273 kb on - strandat 695.283 kb on + strandat 695.286 kb on + strandat 695.287 kb on - strandat 695.295 kb on - strandat 695.299 kb on - strandat 695.299 kb on - strandat 695.354 kb on + strandat 697.443 kb on + strandat 697.443 kb on + strandat 697.445 kb on + strandat 697.445 kb on + strandat 697.445 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Galactomannan from guar 2.5 mg/mL (C)
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695,219 + -1.0
695,227 + -0.8
695,273 - +0.6
695,283 + +0.0
695,286 + -1.5
695,287 - +0.2
695,295 - +0.3
695,299 - -2.0
695,299 - -0.1
695,354 + -0.5
697,443 + +0.1
697,443 + +0.3
697,445 + -1.6
697,445 + -0.8
697,445 + +0.0

Or see this region's nucleotide sequence