Experiment: Galactomannan from guar 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04764 and BACOVA_04765 are separated by 3 nucleotides BACOVA_04765 and BACOVA_04766 are separated by 1 nucleotides BACOVA_04766 and BACOVA_04767 are separated by 26 nucleotides
BACOVA_04764: BACOVA_04764 - hypothetical protein, at 117,929 to 120,115
_04764
BACOVA_04765: BACOVA_04765 - hypothetical protein, at 120,119 to 120,865
_04765
BACOVA_04766: BACOVA_04766 - hypothetical protein, at 120,867 to 121,523
_04766
BACOVA_04767: BACOVA_04767 - hypothetical protein, at 121,550 to 122,074
_04767
Position (kb)
120
121 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 119.243 kb on - strand, within BACOVA_04764 at 119.251 kb on - strand, within BACOVA_04764 at 119.251 kb on - strand, within BACOVA_04764 at 119.283 kb on + strand, within BACOVA_04764 at 119.358 kb on + strand, within BACOVA_04764 at 119.359 kb on - strand, within BACOVA_04764 at 119.364 kb on + strand, within BACOVA_04764 at 119.365 kb on - strand, within BACOVA_04764 at 119.367 kb on + strand, within BACOVA_04764 at 119.367 kb on + strand, within BACOVA_04764 at 119.368 kb on - strand, within BACOVA_04764 at 119.398 kb on - strand, within BACOVA_04764 at 119.404 kb on - strand, within BACOVA_04764 at 119.404 kb on - strand, within BACOVA_04764 at 119.404 kb on - strand, within BACOVA_04764 at 119.431 kb on + strand, within BACOVA_04764 at 119.454 kb on - strand, within BACOVA_04764 at 119.454 kb on - strand, within BACOVA_04764 at 119.554 kb on - strand, within BACOVA_04764 at 119.554 kb on - strand, within BACOVA_04764 at 119.571 kb on - strand, within BACOVA_04764 at 119.573 kb on - strand, within BACOVA_04764 at 119.573 kb on - strand, within BACOVA_04764 at 119.582 kb on - strand, within BACOVA_04764 at 119.584 kb on - strand, within BACOVA_04764 at 119.697 kb on - strand, within BACOVA_04764 at 119.731 kb on - strand, within BACOVA_04764 at 119.740 kb on + strand, within BACOVA_04764 at 119.757 kb on + strand, within BACOVA_04764 at 119.757 kb on + strand, within BACOVA_04764 at 119.758 kb on - strand, within BACOVA_04764 at 119.785 kb on - strand, within BACOVA_04764 at 119.834 kb on + strand, within BACOVA_04764 at 119.928 kb on + strand at 119.929 kb on - strand at 119.990 kb on + strand at 120.030 kb on + strand at 120.031 kb on - strand at 120.059 kb on - strand at 120.060 kb on + strand at 120.078 kb on - strand at 120.084 kb on + strand at 120.095 kb on + strand at 120.096 kb on - strand at 120.131 kb on + strand at 120.150 kb on + strand at 120.264 kb on + strand, within BACOVA_04765 at 120.264 kb on + strand, within BACOVA_04765 at 120.264 kb on + strand, within BACOVA_04765 at 120.297 kb on + strand, within BACOVA_04765 at 120.297 kb on + strand, within BACOVA_04765 at 120.298 kb on - strand, within BACOVA_04765 at 120.333 kb on - strand, within BACOVA_04765 at 120.334 kb on + strand, within BACOVA_04765 at 120.334 kb on + strand, within BACOVA_04765 at 120.334 kb on + strand, within BACOVA_04765 at 120.448 kb on - strand, within BACOVA_04765 at 120.448 kb on - strand, within BACOVA_04765 at 120.516 kb on - strand, within BACOVA_04765 at 120.576 kb on + strand, within BACOVA_04765 at 120.680 kb on - strand, within BACOVA_04765 at 120.793 kb on - strand at 120.798 kb on - strand at 120.824 kb on + strand at 120.829 kb on + strand at 120.841 kb on + strand at 120.841 kb on + strand at 120.842 kb on - strand at 120.846 kb on - strand at 120.846 kb on - strand at 120.885 kb on + strand at 120.886 kb on - strand at 120.914 kb on - strand at 121.012 kb on + strand, within BACOVA_04766 at 121.012 kb on + strand, within BACOVA_04766 at 121.013 kb on - strand, within BACOVA_04766 at 121.013 kb on - strand, within BACOVA_04766 at 121.081 kb on + strand, within BACOVA_04766 at 121.081 kb on + strand, within BACOVA_04766 at 121.112 kb on + strand, within BACOVA_04766 at 121.114 kb on + strand, within BACOVA_04766 at 121.114 kb on + strand, within BACOVA_04766 at 121.186 kb on + strand, within BACOVA_04766 at 121.378 kb on + strand, within BACOVA_04766 at 121.378 kb on + strand, within BACOVA_04766 at 121.388 kb on - strand, within BACOVA_04766 at 121.418 kb on + strand, within BACOVA_04766 at 121.418 kb on + strand, within BACOVA_04766 at 121.419 kb on - strand, within BACOVA_04766 at 121.419 kb on - strand, within BACOVA_04766 at 121.446 kb on + strand, within BACOVA_04766 at 121.518 kb on + strand at 121.518 kb on + strand at 121.519 kb on - strand at 121.610 kb on + strand, within BACOVA_04767 at 121.610 kb on + strand, within BACOVA_04767 at 121.782 kb on + strand, within BACOVA_04767 at 121.837 kb on + strand, within BACOVA_04767
Per-strain Table
Position Strand Gene LocusTag Fraction Galactomannan from guar 2.5 mg/mL (C) remove 119,243 - BACOVA_04764 0.60 +0.7 119,251 - BACOVA_04764 0.60 +0.0 119,251 - BACOVA_04764 0.60 -0.7 119,283 + BACOVA_04764 0.62 +0.5 119,358 + BACOVA_04764 0.65 +0.5 119,359 - BACOVA_04764 0.65 -0.3 119,364 + BACOVA_04764 0.66 -0.1 119,365 - BACOVA_04764 0.66 +1.0 119,367 + BACOVA_04764 0.66 +0.3 119,367 + BACOVA_04764 0.66 -0.5 119,368 - BACOVA_04764 0.66 +1.5 119,398 - BACOVA_04764 0.67 -1.2 119,404 - BACOVA_04764 0.67 +0.1 119,404 - BACOVA_04764 0.67 +0.2 119,404 - BACOVA_04764 0.67 -0.1 119,431 + BACOVA_04764 0.69 -0.8 119,454 - BACOVA_04764 0.70 -0.0 119,454 - BACOVA_04764 0.70 -0.5 119,554 - BACOVA_04764 0.74 -0.5 119,554 - BACOVA_04764 0.74 +0.6 119,571 - BACOVA_04764 0.75 -1.3 119,573 - BACOVA_04764 0.75 +0.5 119,573 - BACOVA_04764 0.75 -1.8 119,582 - BACOVA_04764 0.76 -0.3 119,584 - BACOVA_04764 0.76 +0.8 119,697 - BACOVA_04764 0.81 +0.6 119,731 - BACOVA_04764 0.82 +0.4 119,740 + BACOVA_04764 0.83 +0.3 119,757 + BACOVA_04764 0.84 +0.1 119,757 + BACOVA_04764 0.84 -0.1 119,758 - BACOVA_04764 0.84 -0.1 119,785 - BACOVA_04764 0.85 +0.8 119,834 + BACOVA_04764 0.87 +0.1 119,928 + -1.0 119,929 - -0.9 119,990 + -0.1 120,030 + -1.1 120,031 - +1.2 120,059 - -0.5 120,060 + -0.4 120,078 - +0.5 120,084 + -0.7 120,095 + +0.1 120,096 - -2.1 120,131 + -0.7 120,150 + -1.1 120,264 + BACOVA_04765 0.19 -1.9 120,264 + BACOVA_04765 0.19 -0.5 120,264 + BACOVA_04765 0.19 +1.0 120,297 + BACOVA_04765 0.24 +0.5 120,297 + BACOVA_04765 0.24 -1.1 120,298 - BACOVA_04765 0.24 -0.2 120,333 - BACOVA_04765 0.29 +1.0 120,334 + BACOVA_04765 0.29 +0.8 120,334 + BACOVA_04765 0.29 -0.2 120,334 + BACOVA_04765 0.29 -0.2 120,448 - BACOVA_04765 0.44 +1.1 120,448 - BACOVA_04765 0.44 +3.0 120,516 - BACOVA_04765 0.53 +0.3 120,576 + BACOVA_04765 0.61 +1.0 120,680 - BACOVA_04765 0.75 -0.2 120,793 - +0.2 120,798 - +0.3 120,824 + -0.4 120,829 + -0.1 120,841 + +0.5 120,841 + +0.1 120,842 - +0.2 120,846 - +0.0 120,846 - -0.3 120,885 + -0.9 120,886 - -0.2 120,914 - +1.0 121,012 + BACOVA_04766 0.22 -0.1 121,012 + BACOVA_04766 0.22 +0.7 121,013 - BACOVA_04766 0.22 -0.6 121,013 - BACOVA_04766 0.22 +0.0 121,081 + BACOVA_04766 0.33 -0.2 121,081 + BACOVA_04766 0.33 -0.9 121,112 + BACOVA_04766 0.37 +0.7 121,114 + BACOVA_04766 0.38 -0.5 121,114 + BACOVA_04766 0.38 +0.1 121,186 + BACOVA_04766 0.49 +0.0 121,378 + BACOVA_04766 0.78 -1.2 121,378 + BACOVA_04766 0.78 -0.6 121,388 - BACOVA_04766 0.79 -3.0 121,418 + BACOVA_04766 0.84 +0.1 121,418 + BACOVA_04766 0.84 +1.2 121,419 - BACOVA_04766 0.84 +0.0 121,419 - BACOVA_04766 0.84 -0.8 121,446 + BACOVA_04766 0.88 +1.3 121,518 + -0.6 121,518 + -0.6 121,519 - -1.7 121,610 + BACOVA_04767 0.11 -0.7 121,610 + BACOVA_04767 0.11 +2.2 121,782 + BACOVA_04767 0.44 +0.2 121,837 + BACOVA_04767 0.55 +0.8
Or see this region's nucleotide sequence