Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4821

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
1,830,663	+				+1.2
1,830,663	+				+0.4
1,830,663	+				-0.6
1,830,664	-				-0.1
1,830,664	-				+0.7
1,830,664	-				-0.0
1,830,664	-				-0.2
1,830,707	-				-0.4
1,830,707	-				+0.7
1,830,707	-				-0.3
1,830,722	+				-0.3
1,830,741	-				-0.3
1,831,188	+		GFF4820	0.74	-0.6
1,831,297	-				-0.3
1,831,409	+				-0.4
1,831,425	+				+0.2
1,831,426	-				-0.1
1,831,426	-				-0.2
1,831,531	-				-0.1
1,831,644	+		GFF4821	0.14	+0.3
1,831,644	+		GFF4821	0.14	-0.1
1,831,644	+		GFF4821	0.14	-0.2
1,831,644	+		GFF4821	0.14	-0.5
1,831,645	-		GFF4821	0.14	-0.7
1,831,645	-		GFF4821	0.14	+0.5
1,831,645	-		GFF4821	0.14	-0.6
1,831,645	-		GFF4821	0.14	-0.4
1,831,645	-		GFF4821	0.14	-0.1
1,831,645	-		GFF4821	0.14	+0.7
1,831,645	-		GFF4821	0.14	-0.9
1,831,645	-		GFF4821	0.14	-0.2
1,831,773	+		GFF4821	0.21	+0.1
1,831,773	+		GFF4821	0.21	-0.1
1,831,773	+		GFF4821	0.21	-0.2
1,832,031	+		GFF4821	0.36	+0.1
1,833,144	+				-0.1
1,833,144	+				-0.1
1,833,144	+				-0.9
1,833,144	+				-0.0
1,833,144	+				-0.3
1,833,145	-				+0.6
1,833,145	-				+0.2
1,833,145	-				-0.2
1,833,196	+				+0.0
1,833,196	+				-0.0
1,833,197	-				-1.1
1,833,197	-				+1.4
1,833,712	-		GFF4822	0.79	-0.1
1,833,847	-				-0.4