Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4695

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
1,645,059	+		GFF4694	0.47	-0.2
1,645,060	-		GFF4694	0.47	-0.1
1,645,060	-		GFF4694	0.47	+0.1
1,645,569	+				+0.7
1,645,570	-				+0.3
1,645,590	+				+0.8
1,645,590	+				-1.2
1,645,591	-				+0.0
1,645,591	-				+0.1
1,645,591	-				+0.3
1,646,165	+		GFF4695	0.59	+0.2
1,646,492	+				-0.3
1,646,492	+				-0.4
1,646,492	+				-0.5
1,646,492	+				-0.1
1,646,493	-				-0.1
1,646,493	-				-0.0
1,646,493	-				+0.3
1,646,571	+				-0.1
1,646,572	-				-1.5
1,646,682	+				-0.6
1,646,683	-				+0.2
1,646,718	+				-0.5
1,646,745	+				-0.1
1,646,745	+				-0.1
1,647,030	+		GFF4696	0.21	-0.6
1,647,031	-		GFF4696	0.21	+0.2
1,647,031	-		GFF4696	0.21	-0.6
1,647,031	-		GFF4696	0.21	-0.3
1,647,105	+		GFF4696	0.24	-0.5
1,647,105	+		GFF4696	0.24	-0.2
1,647,106	-		GFF4696	0.24	-0.2
1,647,106	-		GFF4696	0.24	-1.0
1,647,106	-		GFF4696	0.24	+0.9
1,647,106	-		GFF4696	0.24	+0.3
1,647,324	+		GFF4696	0.33	+0.3
1,647,436	-		GFF4696	0.37	+0.4