Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4400

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
1,326,592	-				-0.6
1,326,656	+				+0.0
1,327,080	+		GFF4399	0.69	+0.1
1,327,637	-		GFF4400	0.15	+1.4
1,327,637	-		GFF4400	0.15	-0.9
1,327,806	-		GFF4400	0.46	-1.7
1,328,000	+		GFF4400	0.81	-0.0
1,328,051	+				+0.1
1,328,051	+				-0.2
1,328,052	-				-0.3
1,328,052	-				-0.5
1,328,052	-				+0.1
1,328,052	-				-0.5
1,328,284	+		GFF4401	0.21	+0.0
1,328,402	-		GFF4401	0.44	-0.5