Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF145

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
159,997	+				+1.7
159,998	-				+0.1
160,173	-				-0.6
160,959	+				-0.2
160,959	+				-1.0
160,960	-				-0.1
161,616	+		GFF145	0.35	+0.0
161,617	-		GFF145	0.35	-0.1
161,823	+		GFF145	0.45	-0.2
161,823	+		GFF145	0.45	-1.3
162,952	-				-0.1
162,952	-				-0.6
162,954	+				+0.3
162,955	-				+1.1
162,955	-				-0.5
163,436	+		GFF146	0.56	+0.7
163,436	+		GFF146	0.56	+0.3
163,436	+		GFF146	0.56	+0.7
163,764	+				-0.5
163,764	+				+1.0
163,765	-				+0.3