Strain Fitness in Escherichia fergusonii Becca around EFB2_01557

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
1,627,942	+		EFB2_01555	0.58	-2.1
1,627,942	+		EFB2_01555	0.58	-3.3
1,627,943	-		EFB2_01555	0.59	-0.8
1,627,952	-		EFB2_01555	0.61	-1.9
1,627,981	+		EFB2_01555	0.69	+1.4
1,627,994	-		EFB2_01555	0.73	+1.1
1,628,000	-		EFB2_01555	0.74	+0.3
1,628,015	-		EFB2_01555	0.79	-0.2
1,628,029	+		EFB2_01555	0.82	+0.5
1,628,029	+		EFB2_01555	0.82	+0.1
1,628,029	+		EFB2_01555	0.82	+0.3
1,628,029	+		EFB2_01555	0.82	-0.5
1,628,030	-		EFB2_01555	0.83	-0.4
1,628,030	-		EFB2_01555	0.83	-0.1
1,628,045	-		EFB2_01555	0.87	-0.5
1,628,045	-		EFB2_01555	0.87	-0.3
1,628,063	+				-0.3
1,628,064	-				+2.9
1,628,066	-				-0.8
1,628,066	-				-0.4
1,628,066	-				-0.4
1,628,066	-				-0.6
1,628,071	+				-3.0
1,628,071	+				+1.0
1,628,071	+				-1.3
1,628,072	-				-2.1
1,628,072	-				+0.4
1,628,072	-				+0.9
1,628,074	+				-1.1
1,628,113	-				-0.2
1,628,116	+				+0.7
1,628,116	+				+2.7
1,628,116	+				-2.4
1,628,116	+				+0.9
1,628,116	+				-0.4
1,628,116	+				+1.1
1,628,116	+				+0.8
1,628,116	+				-2.4
1,628,117	-				-1.5
1,628,117	-				+0.3
1,628,117	-				+0.5
1,628,117	-				+0.1
1,628,117	-				-0.6
1,628,117	-				-0.4
1,628,117	-				-0.4
1,628,117	-				-0.5
1,628,117	-				+0.4
1,628,126	+				+3.2
1,628,126	+				-0.1
1,628,127	-				+0.2
1,628,127	-				-0.4
1,628,127	-				-0.4
1,628,127	-				+1.9
1,628,129	+				+0.6
1,628,129	+				+0.3
1,628,129	+				+0.6
1,628,130	-				-0.5
1,628,130	-				+0.2
1,628,130	-				-0.4
1,628,150	+				-0.3
1,628,150	+				-1.2
1,628,150	+				+4.8
1,628,151	-				+0.9
1,628,151	-				+0.7
1,628,155	-				-2.1
1,628,155	-				-0.4
1,628,155	-				-2.6
1,628,155	-				-0.5
1,628,186	-				+0.6
1,628,186	-				-0.5
1,628,249	+		EFB2_01556	0.15	+0.1
1,628,250	-		EFB2_01556	0.16	-1.1
1,628,250	-		EFB2_01556	0.16	-0.6
1,628,286	+		EFB2_01556	0.21	+0.4
1,628,287	-		EFB2_01556	0.21	-2.0
1,628,287	-		EFB2_01556	0.21	-0.1
1,628,308	-		EFB2_01556	0.25	-0.1
1,628,321	+		EFB2_01556	0.27	-1.3
1,628,321	+		EFB2_01556	0.27	-0.6
1,628,321	+		EFB2_01556	0.27	+1.1
1,628,321	+		EFB2_01556	0.27	-1.1
1,628,321	+		EFB2_01556	0.27	+0.5
1,628,321	+		EFB2_01556	0.27	-0.4
1,628,321	+		EFB2_01556	0.27	+0.3
1,628,322	-		EFB2_01556	0.27	+0.6
1,628,322	-		EFB2_01556	0.27	-0.6
1,628,322	-		EFB2_01556	0.27	-0.3
1,628,322	-		EFB2_01556	0.27	+0.4
1,628,322	-		EFB2_01556	0.27	-0.2
1,628,368	+		EFB2_01556	0.34	+0.1
1,628,368	+		EFB2_01556	0.34	+0.5
1,628,368	+		EFB2_01556	0.34	+0.3
1,628,368	+		EFB2_01556	0.34	+0.5
1,628,368	+		EFB2_01556	0.34	-0.6
1,628,368	+		EFB2_01556	0.34	-1.2
1,628,368	+		EFB2_01556	0.34	-0.3
1,628,368	+		EFB2_01556	0.34	+0.5
1,628,368	+		EFB2_01556	0.34	+0.1
1,628,368	+		EFB2_01556	0.34	-0.4
1,628,368	+		EFB2_01556	0.34	-0.2
1,628,368	+		EFB2_01556	0.34	+0.1
1,628,368	+		EFB2_01556	0.34	-0.3
1,628,368	+		EFB2_01556	0.34	-0.5
1,628,368	+		EFB2_01556	0.34	-0.2
1,628,368	+		EFB2_01556	0.34	+2.3
1,628,368	+		EFB2_01556	0.34	-1.1
1,628,368	+		EFB2_01556	0.34	-0.3
1,628,368	+		EFB2_01556	0.34	+1.2
1,628,369	-		EFB2_01556	0.34	+0.6
1,628,369	-		EFB2_01556	0.34	-0.4
1,628,369	-		EFB2_01556	0.34	+0.3
1,628,369	-		EFB2_01556	0.34	+0.6
1,628,369	-		EFB2_01556	0.34	-0.8
1,628,369	-		EFB2_01556	0.34	-0.6
1,628,369	-		EFB2_01556	0.34	+0.7
1,628,369	-		EFB2_01556	0.34	+1.2
1,628,369	-		EFB2_01556	0.34	+0.6
1,628,369	-		EFB2_01556	0.34	-0.4
1,628,369	-		EFB2_01556	0.34	-1.2
1,628,369	-		EFB2_01556	0.34	-0.1
1,628,369	-		EFB2_01556	0.34	+1.6
1,628,369	-		EFB2_01556	0.34	+1.1
1,628,369	-		EFB2_01556	0.34	-0.4
1,628,369	-		EFB2_01556	0.34	-0.3
1,628,369	-		EFB2_01556	0.34	+0.2
1,628,369	-		EFB2_01556	0.34	-0.2
1,628,369	-		EFB2_01556	0.34	-0.5
1,628,375	+		EFB2_01556	0.35	-0.6
1,628,375	+		EFB2_01556	0.35	-0.2
1,628,375	+		EFB2_01556	0.35	-1.6
1,628,376	-		EFB2_01556	0.35	-0.6
1,628,376	-		EFB2_01556	0.35	-1.6
1,628,376	-		EFB2_01556	0.35	-0.3
1,628,376	-		EFB2_01556	0.35	-0.5
1,628,376	-		EFB2_01556	0.35	+0.9
1,628,409	+		EFB2_01556	0.40	+0.1
1,628,414	+		EFB2_01556	0.41	+2.2
1,628,414	+		EFB2_01556	0.41	-1.2
1,628,414	+		EFB2_01556	0.41	-0.1
1,628,442	+		EFB2_01556	0.45	-2.2
1,628,442	+		EFB2_01556	0.45	-0.7
1,628,443	-		EFB2_01556	0.45	+0.2
1,628,443	-		EFB2_01556	0.45	+0.3
1,628,482	+		EFB2_01556	0.51	+0.7
1,628,483	-		EFB2_01556	0.52	-1.0
1,628,483	-		EFB2_01556	0.52	-2.1
1,628,495	-		EFB2_01556	0.53	+0.7
1,628,495	-		EFB2_01556	0.53	-0.3
1,628,495	-		EFB2_01556	0.53	-0.5
1,628,503	+		EFB2_01556	0.55	-0.8
1,628,503	+		EFB2_01556	0.55	+0.4
1,628,504	-		EFB2_01556	0.55	-0.5
1,628,504	-		EFB2_01556	0.55	+0.8
1,628,504	-		EFB2_01556	0.55	+0.3
1,628,564	+		EFB2_01556	0.64	-0.4
1,628,564	+		EFB2_01556	0.64	+1.4
1,628,564	+		EFB2_01556	0.64	-0.6
1,628,564	+		EFB2_01556	0.64	-1.6
1,628,564	+		EFB2_01556	0.64	-1.5
1,628,565	-		EFB2_01556	0.64	+1.1
1,628,565	-		EFB2_01556	0.64	+0.9
1,628,565	-		EFB2_01556	0.64	+1.1
1,628,704	+		EFB2_01556	0.86	-0.9
1,628,705	-		EFB2_01556	0.86	-0.7
1,628,710	+		EFB2_01556	0.87	+0.8
1,628,710	+		EFB2_01556	0.87	+0.8
1,628,710	+		EFB2_01556	0.87	+0.7
1,628,711	-		EFB2_01556	0.87	+0.6
1,628,713	+		EFB2_01556	0.87	-0.3
1,628,713	+		EFB2_01556	0.87	-0.6
1,628,714	-		EFB2_01556	0.87	+1.3
1,628,714	-		EFB2_01556	0.87	+0.6
1,628,714	-		EFB2_01556	0.87	+1.5
1,628,714	-		EFB2_01556	0.87	+1.9
1,628,714	-		EFB2_01556	0.87	+0.4
1,628,714	-		EFB2_01556	0.87	-0.8
1,628,720	+		EFB2_01556	0.88	+0.6
1,628,720	+		EFB2_01556	0.88	-0.6
1,628,721	-		EFB2_01556	0.88	+0.4
1,628,751	+				+0.4
1,628,752	-				+0.6
1,628,783	+				+0.7
1,628,784	-				-0.1
1,628,784	-				+1.9
1,628,784	-				+0.6
1,628,784	-				-0.4
1,628,784	-				+0.5
1,628,813	+				-1.0
1,628,814	-				+0.2
1,628,814	-				-1.6
1,628,834	+				-0.3
1,628,834	+				+0.3
1,628,834	+				+1.5
1,628,834	+				-0.2
1,628,834	+				+0.3
1,628,835	-				+0.4
1,628,835	-				+0.2
1,628,835	-				+0.3
1,628,835	-				+0.4
1,628,835	-				-1.4
1,628,835	-				+0.2
1,628,835	-				-1.0
1,628,835	-				-1.2
1,628,835	-				+0.7
1,628,835	-				-1.1
1,628,835	-				-0.6
1,628,835	-				+1.2
1,628,835	-				+0.4
1,628,836	+				+0.3
1,628,836	+				-1.7
1,628,836	+				+0.9
1,628,836	+				+1.4
1,628,837	-				+0.2
1,628,837	-				+1.5
1,628,837	-				-0.6
1,628,861	+				+3.5
1,628,862	-				+0.1
1,628,862	-				+0.1
1,628,862	-				-1.1
1,628,862	-				-0.5
1,628,862	-				-2.7
1,628,892	+				-0.9
1,628,893	-				+0.9
1,628,893	-				-1.1
1,628,893	-				-3.1
1,628,893	-				+0.8
1,628,894	+				+0.7
1,628,894	+				-1.2
1,628,894	+				-1.5
1,628,894	+				-0.1
1,628,894	+				+3.2
1,628,894	+				-0.3
1,628,894	+				+0.3
1,628,894	+				+0.1
1,628,894	+				+0.9
1,628,894	+				+1.4
1,628,894	+				-2.2
1,628,894	+				-2.1
1,628,894	+				-1.3
1,628,894	+				+0.2
1,628,894	+				+0.8
1,628,895	-				-1.0
1,628,895	-				-2.9
1,628,895	-				+0.8
1,628,895	-				-0.2
1,628,895	-				-0.4
1,628,895	-				-0.0
1,628,895	-				-2.0
1,628,895	-				+2.2
1,628,895	-				-1.3
1,628,895	-				-1.5
1,628,895	-				-0.9
1,628,895	-				+0.8
1,628,895	-				+1.8
1,628,895	-				+1.3
1,628,895	-				+1.7
1,628,895	-				-0.8
1,628,895	-				+0.6
1,628,895	-				+0.6
1,628,895	-				-0.1
1,628,895	-				+1.4
1,628,895	-				-3.0
1,628,916	+				-0.4
1,628,916	+				+0.4
1,628,917	-				-0.6
1,628,930	+				-0.6
1,628,930	+				+0.9
1,628,930	+				-1.1
1,628,930	+				+1.0
1,628,930	+				-0.9
1,628,930	+				+0.4
1,628,930	+				-0.6
1,628,930	+				-2.1
1,628,930	+				-2.0
1,628,930	+				-0.5
1,628,930	+				+1.4
1,628,930	+				-0.5
1,628,930	+				-0.6
1,628,930	+				+0.1
1,628,930	+				-0.7
1,628,930	+				+0.4
1,628,931	-				-0.6
1,628,931	-				-2.1
1,628,931	-				+0.0
1,628,931	-				-0.1
1,628,931	-				+0.4
1,628,937	+				+0.6
1,628,983	+				+1.4
1,628,983	+				+1.2
1,628,983	+				+0.1
1,628,983	+				-1.9
1,628,983	+				-0.7
1,628,983	+				+0.4
1,628,983	+				-0.2
1,628,983	+				-0.2
1,628,983	+				+0.7
1,628,983	+				-0.2
1,628,983	+				-0.0
1,628,983	+				-0.8
1,628,983	+				+0.1
1,628,983	+				-0.5
1,628,983	+				+1.1
1,628,983	+				-0.3
1,628,983	+				-2.3
1,628,983	+				-1.4
1,628,983	+				+0.7
1,628,983	+				-0.0
1,628,983	+				-0.4
1,628,984	-				-0.4
1,628,984	-				-0.1
1,628,984	-				+0.3
1,628,984	-				-0.1
1,628,984	-				+0.9
1,628,984	-				+0.2
1,628,984	-				-1.1
1,628,984	-				+0.7
1,628,984	-				+0.8
1,628,984	-				+0.0
1,628,984	-				-0.1
1,628,984	-				-3.8
1,628,984	-				-0.4
1,628,984	-				+0.4
1,628,984	-				-1.1
1,628,984	-				+0.4
1,629,033	+		EFB2_01557	0.16	-0.9
1,629,033	+		EFB2_01557	0.16	+1.2
1,629,034	-		EFB2_01557	0.16	+0.9
1,629,088	+		EFB2_01557	0.24	-0.3
1,629,113	+		EFB2_01557	0.28	-0.3
1,629,116	+		EFB2_01557	0.29	+0.8
1,629,116	+		EFB2_01557	0.29	-0.5
1,629,116	+		EFB2_01557	0.29	+0.7
1,629,117	-		EFB2_01557	0.29	+0.7
1,629,117	-		EFB2_01557	0.29	+1.4
1,629,117	-		EFB2_01557	0.29	-0.3
1,629,163	+		EFB2_01557	0.36	-0.1
1,629,163	+		EFB2_01557	0.36	-1.4
1,629,163	+		EFB2_01557	0.36	-1.3
1,629,201	+		EFB2_01557	0.42	-0.6
1,629,201	+		EFB2_01557	0.42	-0.3
1,629,201	+		EFB2_01557	0.42	-0.1
1,629,201	+		EFB2_01557	0.42	+0.5
1,629,201	+		EFB2_01557	0.42	-0.6
1,629,201	+		EFB2_01557	0.42	+0.5
1,629,201	+		EFB2_01557	0.42	-1.6
1,629,201	+		EFB2_01557	0.42	-1.8
1,629,201	+		EFB2_01557	0.42	-0.1
1,629,201	+		EFB2_01557	0.42	-0.6
1,629,202	-		EFB2_01557	0.42	+0.3
1,629,202	-		EFB2_01557	0.42	-1.0
1,629,202	-		EFB2_01557	0.42	-0.4
1,629,202	-		EFB2_01557	0.42	+0.4
1,629,202	-		EFB2_01557	0.42	+0.7
1,629,202	-		EFB2_01557	0.42	-1.1
1,629,202	-		EFB2_01557	0.42	-0.5
1,629,202	-		EFB2_01557	0.42	-0.2
1,629,202	-		EFB2_01557	0.42	+1.6
1,629,202	-		EFB2_01557	0.42	+0.4
1,629,202	-		EFB2_01557	0.42	+0.2
1,629,202	-		EFB2_01557	0.42	-0.6
1,629,202	-		EFB2_01557	0.42	+0.7
1,629,202	-		EFB2_01557	0.42	-0.3
1,629,206	-		EFB2_01557	0.42	+0.1
1,629,332	+		EFB2_01557	0.62	-0.8
1,629,332	+		EFB2_01557	0.62	-2.1
1,629,389	+		EFB2_01557	0.71	-1.5
1,629,389	+		EFB2_01557	0.71	+0.8
1,629,390	-		EFB2_01557	0.71	+0.1
1,629,410	+		EFB2_01557	0.74	+0.2
1,629,410	+		EFB2_01557	0.74	-0.1
1,629,410	+		EFB2_01557	0.74	+0.1
1,629,410	+		EFB2_01557	0.74	+0.4
1,629,411	-		EFB2_01557	0.74	-2.4
1,629,411	-		EFB2_01557	0.74	-0.1
1,629,411	-		EFB2_01557	0.74	-0.4
1,629,411	-		EFB2_01557	0.74	-3.6
1,629,411	-		EFB2_01557	0.74	-2.1
1,629,467	+		EFB2_01557	0.83	+0.2
1,629,468	-		EFB2_01557	0.83	+1.2
1,629,468	-		EFB2_01557	0.83	-1.2
1,629,470	+		EFB2_01557	0.83	+0.7
1,629,470	+		EFB2_01557	0.83	-1.5
1,629,470	+		EFB2_01557	0.83	+1.5
1,629,470	+		EFB2_01557	0.83	+0.9
1,629,470	+		EFB2_01557	0.83	-0.4
1,629,470	+		EFB2_01557	0.83	-0.7
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1,630,559	+		EFB2_01559	0.59	+0.2
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