Strain Fitness in Escherichia fergusonii Becca around EFB2_01116

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
1,164,378	+		EFB2_01115	0.51	+0.1
1,164,379	-		EFB2_01115	0.51	-0.2
1,164,407	-		EFB2_01115	0.52	-0.3
1,164,421	+		EFB2_01115	0.53	-0.8
1,164,422	-		EFB2_01115	0.53	-0.1
1,164,446	-		EFB2_01115	0.55	+1.3
1,164,507	+		EFB2_01115	0.58	+0.6
1,164,507	+		EFB2_01115	0.58	-1.9
1,164,508	-		EFB2_01115	0.58	-0.2
1,164,508	-		EFB2_01115	0.58	+0.2
1,164,547	+		EFB2_01115	0.60	-0.4
1,164,547	+		EFB2_01115	0.60	+1.3
1,164,588	+		EFB2_01115	0.63	-0.1
1,164,588	+		EFB2_01115	0.63	-0.3
1,164,588	+		EFB2_01115	0.63	+0.4
1,164,625	+		EFB2_01115	0.65	+0.6
1,164,625	+		EFB2_01115	0.65	+0.8
1,164,723	+		EFB2_01115	0.70	+0.5
1,164,723	+		EFB2_01115	0.70	-0.2
1,164,723	+		EFB2_01115	0.70	-0.6
1,164,723	+		EFB2_01115	0.70	-0.4
1,164,723	+		EFB2_01115	0.70	+1.8
1,164,723	+		EFB2_01115	0.70	-1.5
1,164,723	+		EFB2_01115	0.70	-0.0
1,164,724	-		EFB2_01115	0.70	+0.6
1,164,724	-		EFB2_01115	0.70	-2.0
1,164,724	-		EFB2_01115	0.70	-0.7
1,164,724	-		EFB2_01115	0.70	-1.0
1,164,724	-		EFB2_01115	0.70	-0.4
1,164,724	-		EFB2_01115	0.70	-0.1
1,164,724	-		EFB2_01115	0.70	-0.4
1,164,724	-		EFB2_01115	0.70	-0.6
1,164,724	-		EFB2_01115	0.70	-2.1
1,164,730	+		EFB2_01115	0.71	+0.4
1,164,731	-		EFB2_01115	0.71	+1.0
1,164,731	-		EFB2_01115	0.71	+1.4
1,164,731	-		EFB2_01115	0.71	-0.3
1,164,731	-		EFB2_01115	0.71	+0.2
1,164,837	+		EFB2_01115	0.77	-0.2
1,164,837	+		EFB2_01115	0.77	-0.7
1,164,837	+		EFB2_01115	0.77	+0.6
1,164,837	+		EFB2_01115	0.77	-1.2
1,164,837	+		EFB2_01115	0.77	+1.1
1,164,838	-		EFB2_01115	0.77	-1.2
1,164,838	-		EFB2_01115	0.77	-0.1
1,164,838	-		EFB2_01115	0.77	-0.3
1,164,838	-		EFB2_01115	0.77	+1.3
1,164,838	-		EFB2_01115	0.77	-0.2
1,164,838	-		EFB2_01115	0.77	-0.1
1,164,894	+		EFB2_01115	0.80	-0.7
1,164,894	+		EFB2_01115	0.80	-0.2
1,164,895	-		EFB2_01115	0.80	+0.0
1,164,978	+		EFB2_01115	0.85	-1.4
1,164,978	+		EFB2_01115	0.85	-0.4
1,164,978	+		EFB2_01115	0.85	-2.4
1,164,978	+		EFB2_01115	0.85	-0.5
1,165,000	+		EFB2_01115	0.86	-0.4
1,165,013	+		EFB2_01115	0.86	+1.4
1,165,013	+		EFB2_01115	0.86	+0.6
1,165,013	+		EFB2_01115	0.86	+0.8
1,165,013	+		EFB2_01115	0.86	+0.3
1,165,013	+		EFB2_01115	0.86	+0.6
1,165,013	+		EFB2_01115	0.86	-1.3
1,165,014	-		EFB2_01115	0.87	-1.1
1,165,014	-		EFB2_01115	0.87	+1.7
1,165,070	-		EFB2_01115	0.90	-0.3
1,165,070	-		EFB2_01115	0.90	-0.7
1,165,076	-				+0.0
1,165,076	-				+0.2
1,165,157	-				+0.3
1,165,270	-				-1.3
1,165,280	+				-1.3
1,165,280	+				-0.2
1,165,281	-				+0.6
1,165,281	-				+0.9
1,165,281	-				-1.2
1,165,281	-				+0.3
1,165,290	+				+0.4
1,165,290	+				+0.1
1,165,290	+				+0.7
1,165,290	+				-0.1
1,165,290	+				+1.3
1,165,290	+				+1.1
1,165,290	+				-0.1
1,165,290	+				+1.1
1,165,290	+				+0.9
1,165,290	+				+0.9
1,165,290	+				+0.2
1,165,290	+				+0.1
1,165,290	+				-0.3
1,165,290	+				+0.3
1,165,290	+				+1.3
1,165,290	+				+0.6
1,165,290	+				+0.0
1,165,291	-				+0.7
1,165,291	-				-0.5
1,165,291	-				+1.0
1,165,291	-				-0.6
1,165,291	-				+0.8
1,165,291	-				+1.0
1,165,291	-				+1.3
1,165,291	-				-0.5
1,165,291	-				+0.2
1,165,291	-				+0.4
1,165,323	+				+0.9
1,165,323	+				+0.7
1,165,324	-				-0.9
1,165,324	-				-0.5
1,165,324	-				-0.6
1,165,324	-				-1.3
1,165,417	-		EFB2_01116	0.10	-0.0
1,165,429	-		EFB2_01116	0.11	-0.6
1,165,429	-		EFB2_01116	0.11	-0.5
1,165,437	+		EFB2_01116	0.12	-0.3
1,165,437	+		EFB2_01116	0.12	+0.8
1,165,437	+		EFB2_01116	0.12	+3.4
1,165,437	+		EFB2_01116	0.12	+0.3
1,165,438	-		EFB2_01116	0.12	-0.0
1,165,438	-		EFB2_01116	0.12	-0.4
1,165,438	-		EFB2_01116	0.12	+0.4
1,165,438	-		EFB2_01116	0.12	+0.4
1,165,457	+		EFB2_01116	0.13	-0.5
1,165,457	+		EFB2_01116	0.13	-0.2
1,165,457	+		EFB2_01116	0.13	-0.4
1,165,457	+		EFB2_01116	0.13	+0.3
1,165,457	+		EFB2_01116	0.13	+0.3
1,165,457	+		EFB2_01116	0.13	+0.3
1,165,457	+		EFB2_01116	0.13	-0.1
1,165,457	+		EFB2_01116	0.13	+0.5
1,165,457	+		EFB2_01116	0.13	-1.0
1,165,457	+		EFB2_01116	0.13	-0.8
1,165,457	+		EFB2_01116	0.13	-0.0
1,165,457	+		EFB2_01116	0.13	+0.6
1,165,457	+		EFB2_01116	0.13	+0.9
1,165,457	+		EFB2_01116	0.13	+0.6
1,165,457	+		EFB2_01116	0.13	-0.6
1,165,457	+		EFB2_01116	0.13	+1.7
1,165,458	-		EFB2_01116	0.13	-1.4
1,165,458	-		EFB2_01116	0.13	+1.1
1,165,458	-		EFB2_01116	0.13	+0.1
1,165,458	-		EFB2_01116	0.13	-1.1
1,165,458	-		EFB2_01116	0.13	-0.5
1,165,458	-		EFB2_01116	0.13	+1.0
1,165,458	-		EFB2_01116	0.13	-1.7
1,165,482	+		EFB2_01116	0.15	-0.5
1,165,482	+		EFB2_01116	0.15	+0.4
1,165,483	-		EFB2_01116	0.15	-0.9
1,165,521	+		EFB2_01116	0.18	+0.4
1,165,521	+		EFB2_01116	0.18	+0.3
1,165,522	-		EFB2_01116	0.18	+1.2
1,165,522	-		EFB2_01116	0.18	+0.0
1,165,522	-		EFB2_01116	0.18	+0.8
1,165,522	-		EFB2_01116	0.18	-0.9
1,165,522	-		EFB2_01116	0.18	-0.4
1,165,522	-		EFB2_01116	0.18	+1.7
1,165,534	+		EFB2_01116	0.19	-3.6
1,165,534	+		EFB2_01116	0.19	-0.6
1,165,534	+		EFB2_01116	0.19	-0.7
1,165,535	-		EFB2_01116	0.19	+1.1
1,165,535	-		EFB2_01116	0.19	+0.2
1,165,535	-		EFB2_01116	0.19	-2.6
1,165,546	+		EFB2_01116	0.20	-3.1
1,165,546	+		EFB2_01116	0.20	+0.2
1,165,546	+		EFB2_01116	0.20	-0.7
1,165,546	+		EFB2_01116	0.20	+0.6
1,165,546	+		EFB2_01116	0.20	+0.8
1,165,547	-		EFB2_01116	0.20	+0.4
1,165,547	-		EFB2_01116	0.20	+1.1
1,165,549	+		EFB2_01116	0.20	-0.1
1,165,549	+		EFB2_01116	0.20	+0.2
1,165,549	+		EFB2_01116	0.20	-0.2
1,165,550	-		EFB2_01116	0.20	+0.8
1,165,550	-		EFB2_01116	0.20	+0.1
1,165,550	-		EFB2_01116	0.20	+0.3
1,165,550	-		EFB2_01116	0.20	-0.4
1,165,610	+		EFB2_01116	0.25	-0.1
1,165,610	+		EFB2_01116	0.25	+0.7
1,165,611	-		EFB2_01116	0.25	+0.7
1,165,611	-		EFB2_01116	0.25	+0.7
1,165,611	-		EFB2_01116	0.25	+0.6
1,165,611	-		EFB2_01116	0.25	-0.5
1,165,657	-		EFB2_01116	0.28	+0.1
1,165,674	+		EFB2_01116	0.30	+1.1
1,165,674	+		EFB2_01116	0.30	+0.2
1,165,674	+		EFB2_01116	0.30	+1.4
1,165,703	+		EFB2_01116	0.32	+0.7
1,165,703	+		EFB2_01116	0.32	+0.0
1,165,703	+		EFB2_01116	0.32	+0.2
1,165,703	+		EFB2_01116	0.32	+1.0
1,165,703	+		EFB2_01116	0.32	+0.4
1,165,703	+		EFB2_01116	0.32	+1.1
1,165,703	+		EFB2_01116	0.32	+1.2
1,165,703	+		EFB2_01116	0.32	-0.9
1,165,703	+		EFB2_01116	0.32	+2.0
1,165,703	+		EFB2_01116	0.32	-0.1
1,165,703	+		EFB2_01116	0.32	+0.2
1,165,703	+		EFB2_01116	0.32	+0.2
1,165,703	+		EFB2_01116	0.32	-0.1
1,165,703	+		EFB2_01116	0.32	-0.9
1,165,703	-		EFB2_01116	0.32	+0.2
1,165,704	-		EFB2_01116	0.32	-0.2
1,165,704	-		EFB2_01116	0.32	+0.4
1,165,704	-		EFB2_01116	0.32	-0.2
1,165,704	-		EFB2_01116	0.32	-0.2
1,165,704	-		EFB2_01116	0.32	-1.2
1,165,704	-		EFB2_01116	0.32	-0.3
1,165,704	-		EFB2_01116	0.32	+1.3
1,165,707	+		EFB2_01116	0.32	-0.6
1,165,707	+		EFB2_01116	0.32	-0.7
1,165,728	+		EFB2_01116	0.34	+0.3
1,165,728	+		EFB2_01116	0.34	-0.2
1,165,728	+		EFB2_01116	0.34	-0.8
1,165,729	-		EFB2_01116	0.34	-1.1
1,165,729	-		EFB2_01116	0.34	-0.0
1,165,744	+		EFB2_01116	0.35	+3.6
1,165,744	+		EFB2_01116	0.35	+1.7
1,165,745	-		EFB2_01116	0.35	+1.8
1,165,745	-		EFB2_01116	0.35	+1.2
1,165,751	+		EFB2_01116	0.35	-0.9
1,165,751	+		EFB2_01116	0.35	-0.3
1,165,763	+		EFB2_01116	0.36	-0.0
1,165,763	+		EFB2_01116	0.36	-2.1
1,165,763	+		EFB2_01116	0.36	+0.6
1,165,763	+		EFB2_01116	0.36	+0.3
1,165,763	+		EFB2_01116	0.36	+1.3
1,165,763	+		EFB2_01116	0.36	+1.1
1,165,764	-		EFB2_01116	0.36	-0.0
1,165,764	-		EFB2_01116	0.36	-0.4
1,165,764	-		EFB2_01116	0.36	+0.3
1,165,764	-		EFB2_01116	0.36	+0.3
1,165,764	-		EFB2_01116	0.36	-0.0
1,165,794	-		EFB2_01116	0.39	-0.2
1,165,794	-		EFB2_01116	0.39	+0.4
1,165,794	-		EFB2_01116	0.39	+0.6
1,165,810	+		EFB2_01116	0.40	-0.1
1,165,810	+		EFB2_01116	0.40	+0.2
1,165,810	+		EFB2_01116	0.40	+0.2
1,165,810	+		EFB2_01116	0.40	-0.8
1,165,811	-		EFB2_01116	0.40	+0.2
1,165,811	-		EFB2_01116	0.40	+0.9
1,165,811	-		EFB2_01116	0.40	+0.2
1,165,811	-		EFB2_01116	0.40	-0.3
1,165,833	+		EFB2_01116	0.42	+2.0
1,165,834	-		EFB2_01116	0.42	-1.7
1,165,891	-		EFB2_01116	0.46	+0.0
1,165,891	-		EFB2_01116	0.46	+2.0
1,165,942	+		EFB2_01116	0.50	-2.1
1,165,965	+		EFB2_01116	0.52	-0.1
1,165,965	+		EFB2_01116	0.52	-0.2
1,165,965	+		EFB2_01116	0.52	-0.3
1,165,965	+		EFB2_01116	0.52	-0.4
1,165,965	+		EFB2_01116	0.52	-2.3
1,165,965	+		EFB2_01116	0.52	-2.1
1,165,965	+		EFB2_01116	0.52	-0.2
1,165,965	+		EFB2_01116	0.52	+0.1
1,165,965	+		EFB2_01116	0.52	-0.1
1,165,965	+		EFB2_01116	0.52	-0.1
1,165,965	+		EFB2_01116	0.52	-1.2
1,165,965	+		EFB2_01116	0.52	-1.0
1,165,965	+		EFB2_01116	0.52	-1.3
1,165,965	+		EFB2_01116	0.52	+0.0
1,165,965	+		EFB2_01116	0.52	+0.5
1,165,965	+		EFB2_01116	0.52	+0.3
1,165,965	+		EFB2_01116	0.52	-0.2
1,165,965	+		EFB2_01116	0.52	+1.3
1,165,965	+		EFB2_01116	0.52	-0.6
1,165,965	+		EFB2_01116	0.52	-1.4
1,165,965	+		EFB2_01116	0.52	-0.1
1,165,965	+		EFB2_01116	0.52	-2.5
1,165,965	+		EFB2_01116	0.52	+0.0
1,165,965	+		EFB2_01116	0.52	-1.9
1,165,965	+		EFB2_01116	0.52	+0.9
1,165,966	-		EFB2_01116	0.52	+0.0
1,165,966	-		EFB2_01116	0.52	+0.3
1,165,966	-		EFB2_01116	0.52	+0.2
1,165,966	-		EFB2_01116	0.52	-0.6
1,165,966	-		EFB2_01116	0.52	-0.3
1,165,966	-		EFB2_01116	0.52	-0.1
1,165,966	-		EFB2_01116	0.52	+0.2
1,165,966	-		EFB2_01116	0.52	-0.2
1,165,966	-		EFB2_01116	0.52	-1.4
1,165,966	-		EFB2_01116	0.52	-0.0
1,165,966	-		EFB2_01116	0.52	+0.1
1,165,966	-		EFB2_01116	0.52	-1.7
1,165,966	-		EFB2_01116	0.52	-0.3
1,165,966	-		EFB2_01116	0.52	-0.3
1,165,966	-		EFB2_01116	0.52	+0.1
1,165,966	-		EFB2_01116	0.52	-0.3
1,165,966	-		EFB2_01116	0.52	-0.3
1,165,966	-		EFB2_01116	0.52	-0.1
1,165,966	-		EFB2_01116	0.52	-0.6
1,165,966	-		EFB2_01116	0.52	-0.7
1,165,966	-		EFB2_01116	0.52	-1.0
1,165,966	-		EFB2_01116	0.52	+0.7
1,165,966	-		EFB2_01116	0.52	-0.9
1,165,967	+		EFB2_01116	0.52	+1.2
1,165,967	+		EFB2_01116	0.52	-1.2
1,165,967	+		EFB2_01116	0.52	-2.6
1,165,967	+		EFB2_01116	0.52	-0.7
1,165,967	+		EFB2_01116	0.52	+0.4
1,165,967	+		EFB2_01116	0.52	-0.0
1,165,967	+		EFB2_01116	0.52	+1.0
1,165,967	+		EFB2_01116	0.52	-0.5
1,165,967	+		EFB2_01116	0.52	+0.1
1,165,967	+		EFB2_01116	0.52	+0.8
1,165,967	+		EFB2_01116	0.52	-1.7
1,165,967	+		EFB2_01116	0.52	-0.4
1,165,967	+		EFB2_01116	0.52	+0.1
1,165,967	+		EFB2_01116	0.52	+0.2
1,165,967	+		EFB2_01116	0.52	+1.1
1,165,967	+		EFB2_01116	0.52	+0.9
1,165,967	+		EFB2_01116	0.52	+0.3
1,165,967	+		EFB2_01116	0.52	-0.1
1,165,967	+		EFB2_01116	0.52	-0.9
1,165,967	+		EFB2_01116	0.52	-1.0
1,165,967	+		EFB2_01116	0.52	-0.5
1,165,967	+		EFB2_01116	0.52	-0.0
1,165,967	+		EFB2_01116	0.52	+0.7
1,165,967	+		EFB2_01116	0.52	+1.8
1,165,967	+		EFB2_01116	0.52	-0.7
1,165,967	+		EFB2_01116	0.52	-0.1
1,165,967	+		EFB2_01116	0.52	+0.4
1,165,967	+		EFB2_01116	0.52	-2.5
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