Strain Fitness in Escherichia fergusonii Becca around EFB2_00842

Experiment: BHIS_CaCl2 no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control
863,808	+		EFB2_00841	0.82	-0.3
863,808	+		EFB2_00841	0.82	-0.6
863,808	+		EFB2_00841	0.82	+0.2
863,808	+		EFB2_00841	0.82	+0.5
863,808	+		EFB2_00841	0.82	-0.5
863,808	+		EFB2_00841	0.82	-1.1
863,809	-		EFB2_00841	0.82	-0.4
863,809	-		EFB2_00841	0.82	-0.2
863,809	-		EFB2_00841	0.82	-0.7
863,809	-		EFB2_00841	0.82	-0.2
863,809	-		EFB2_00841	0.82	-0.0
863,812	+		EFB2_00841	0.82	+1.5
863,812	+		EFB2_00841	0.82	+0.4
863,812	+		EFB2_00841	0.82	-0.5
863,812	+		EFB2_00841	0.82	+0.7
863,812	+		EFB2_00841	0.82	+0.5
863,812	+		EFB2_00841	0.82	+0.4
863,812	+		EFB2_00841	0.82	+2.1
863,812	+		EFB2_00841	0.82	-0.4
863,812	+		EFB2_00841	0.82	-0.6
863,812	+		EFB2_00841	0.82	+1.1
863,812	+		EFB2_00841	0.82	-0.5
863,812	+		EFB2_00841	0.82	-0.7
863,812	+		EFB2_00841	0.82	-0.3
863,812	+		EFB2_00841	0.82	+0.2
863,812	+		EFB2_00841	0.82	-0.1
863,812	+		EFB2_00841	0.82	+0.4
863,812	+		EFB2_00841	0.82	-1.8
863,812	+		EFB2_00841	0.82	-1.8
863,812	+		EFB2_00841	0.82	-0.1
863,812	+		EFB2_00841	0.82	+1.0
863,813	-		EFB2_00841	0.82	-0.5
863,813	-		EFB2_00841	0.82	+0.2
863,813	-		EFB2_00841	0.82	-1.3
863,813	-		EFB2_00841	0.82	+0.4
863,813	-		EFB2_00841	0.82	+0.1
863,813	-		EFB2_00841	0.82	-1.6
863,813	-		EFB2_00841	0.82	-1.5
863,813	-		EFB2_00841	0.82	-0.4
863,813	-		EFB2_00841	0.82	-0.9
863,813	-		EFB2_00841	0.82	-0.5
863,813	-		EFB2_00841	0.82	-0.1
863,813	-		EFB2_00841	0.82	+0.5
863,813	-		EFB2_00841	0.82	-1.8
863,813	-		EFB2_00841	0.82	-2.1
863,832	+		EFB2_00841	0.83	+0.8
863,832	+		EFB2_00841	0.83	-0.2
863,832	+		EFB2_00841	0.83	-1.0
863,832	+		EFB2_00841	0.83	-1.3
863,833	-		EFB2_00841	0.83	+0.6
863,833	-		EFB2_00841	0.83	+0.3
863,979	+		EFB2_00841	0.86	+1.1
863,979	+		EFB2_00841	0.86	+1.0
864,006	-		EFB2_00841	0.87	+0.2
864,046	+		EFB2_00841	0.87	-2.0
864,046	+		EFB2_00841	0.87	-1.5
864,046	+		EFB2_00841	0.87	-1.9
864,046	+		EFB2_00841	0.87	-0.6
864,046	+		EFB2_00841	0.87	-1.3
864,046	+		EFB2_00841	0.87	-0.7
864,046	+		EFB2_00841	0.87	+1.1
864,046	+		EFB2_00841	0.87	+0.5
864,046	+		EFB2_00841	0.87	+0.9
864,046	+		EFB2_00841	0.87	-0.1
864,046	+		EFB2_00841	0.87	-1.4
864,046	+		EFB2_00841	0.87	+1.5
864,046	+		EFB2_00841	0.87	+0.9
864,046	+		EFB2_00841	0.87	-0.3
864,047	-		EFB2_00841	0.87	-1.9
864,047	-		EFB2_00841	0.87	-0.1
864,047	-		EFB2_00841	0.87	+0.3
864,047	-		EFB2_00841	0.87	+1.7
864,047	-		EFB2_00841	0.87	+0.4
864,047	-		EFB2_00841	0.87	+0.4
864,047	-		EFB2_00841	0.87	-0.5
864,047	-		EFB2_00841	0.87	+0.4
864,061	+		EFB2_00841	0.88	-0.4
864,062	-		EFB2_00841	0.88	+0.7
864,062	-		EFB2_00841	0.88	-1.7
864,096	+		EFB2_00841	0.89	+2.9
864,096	+		EFB2_00841	0.89	-1.2
864,097	-		EFB2_00841	0.89	+1.2
864,113	-		EFB2_00841	0.89	-2.1
864,113	-		EFB2_00841	0.89	-0.3
864,175	+				+0.1
864,175	+				+0.0
864,175	+				-0.6
864,175	+				+0.1
864,175	+				+0.6
864,175	+				-0.6
864,175	+				+0.6
864,175	+				+0.2
864,175	+				-0.3
864,175	+				+0.6
864,175	+				+0.5
864,175	+				+0.4
864,175	+				+0.5
864,176	-				+0.9
864,176	-				-1.2
864,176	-				+0.4
864,176	-				-0.2
864,176	-				-0.2
864,176	-				+0.1
864,176	-				+1.0
864,176	-				-0.2
864,176	-				-0.2
864,176	-				-0.5
864,176	-				+0.6
864,176	-				-2.0
864,176	-				+0.6
864,176	-				-0.2
864,176	-				-0.7
864,176	-				-1.9
864,176	-				-0.0
864,176	-				-1.5
864,176	-				-0.2
864,176	-				+0.8
864,213	+				-0.2
864,253	+				-0.2
864,253	+				+0.6
864,254	-				-0.2
864,254	-				-0.9
864,254	-				-1.1
864,254	-				-0.2
864,306	+				-0.4
864,306	+				-0.9
864,307	-				+0.9
864,330	+				-3.7
864,330	+				-0.9
864,331	-				+0.7
864,355	+				+0.3
864,355	+				-0.2
864,355	+				+0.6
864,355	+				-0.4
864,355	+				+0.4
864,356	-				-1.6
864,356	-				+0.4
864,470	-				-0.9
864,470	-				-1.2
864,476	+				+0.0
864,526	+				-0.8
864,526	+				+0.6
864,527	-				-0.8
864,527	-				-0.7
864,527	-				-1.4
864,527	-				+0.5
864,582	+				+0.3
864,583	-				-2.8
864,583	-				+0.6
864,600	+				+0.8
864,600	+				-3.3
864,600	+				-0.5
864,600	+				-0.0
864,600	+				-0.2
864,600	+				+0.2
864,600	+				+0.4
864,600	+				+2.1
864,600	+				+1.2
864,600	+				+0.4
864,601	-				-2.1
864,601	-				-3.9
864,601	-				-1.0
864,601	-				+3.1
864,601	-				+0.2
864,601	-				+0.1
864,601	-				-1.3
864,601	-				+0.9
864,601	-				+0.6
864,601	-				+0.5
864,601	-				-0.3
864,601	-				+0.3
864,616	+				+2.4
864,616	+				+0.2
864,616	+				+1.0
864,617	-				+0.7
864,617	-				-0.7
864,625	-				-0.2
864,625	-				+1.2
864,663	+				+1.6
864,663	+				+0.5
864,663	+				-0.6
864,663	+				-0.3
864,663	+				+0.5
864,663	+				-1.5
864,678	+				-1.3
864,705	-				+0.3
864,727	-				+1.6
864,727	-				-0.3
864,727	-				+0.0
864,733	+				-0.5
864,733	+				+0.0
864,733	+				-0.7
864,733	+				+0.5
864,733	+				-0.6
864,733	+				-2.8
864,733	+				+0.9
864,733	+				-0.2
864,733	+				+0.5
864,733	+				+0.2
864,734	-				+0.1
864,734	-				+0.6
864,734	-				-0.5
864,734	-				-0.1
864,734	-				+0.8
864,734	-				-0.3
864,734	-				+1.7
864,734	-				+0.9
864,734	-				-0.1
864,734	-				+0.4
864,734	-				-0.1
864,734	-				-3.0
864,734	-				-0.6
864,762	-				-0.3
864,762	-				-0.2
864,762	-				+0.7
864,762	-				-1.0
864,770	+				-0.5
864,770	+				+0.6
864,770	+				+0.0
864,770	+				-0.5
864,771	-				-0.4
864,771	-				+1.0
864,771	-				+1.5
864,771	-				-1.8
864,771	-				-1.7
864,807	-				-1.0
864,937	+		EFB2_00842	0.19	-0.6
864,937	+		EFB2_00842	0.19	+0.2
864,937	+		EFB2_00842	0.19	-1.0
864,937	+		EFB2_00842	0.19	+0.3
864,937	+		EFB2_00842	0.19	+0.1
864,938	-		EFB2_00842	0.19	-2.2
864,938	-		EFB2_00842	0.19	-1.3
864,951	+		EFB2_00842	0.21	-0.8
864,952	-		EFB2_00842	0.21	+0.5
864,997	+		EFB2_00842	0.27	+0.4
864,998	-		EFB2_00842	0.27	+0.1
864,998	-		EFB2_00842	0.27	+0.7
865,015	+		EFB2_00842	0.29	-1.2
865,015	+		EFB2_00842	0.29	+0.1
865,015	+		EFB2_00842	0.29	-3.1
865,015	+		EFB2_00842	0.29	-0.1
865,016	-		EFB2_00842	0.29	-0.1
865,016	-		EFB2_00842	0.29	+0.8
865,016	-		EFB2_00842	0.29	+0.3
865,101	+		EFB2_00842	0.39	-2.1
865,173	+		EFB2_00842	0.48	-0.8
865,173	+		EFB2_00842	0.48	-1.8
865,173	+		EFB2_00842	0.48	+1.0
865,173	+		EFB2_00842	0.48	+0.6
865,173	+		EFB2_00842	0.48	+0.3
865,173	+		EFB2_00842	0.48	-1.2
865,173	+		EFB2_00842	0.48	-2.2
865,173	+		EFB2_00842	0.48	+0.6
865,174	-		EFB2_00842	0.48	-0.6
865,174	-		EFB2_00842	0.48	-1.6
865,174	-		EFB2_00842	0.48	-0.5
865,174	-		EFB2_00842	0.48	+0.1
865,174	-		EFB2_00842	0.48	+0.2
865,174	-		EFB2_00842	0.48	+1.0
865,174	-		EFB2_00842	0.48	+0.2
865,240	+		EFB2_00842	0.57	-0.5
865,251	+		EFB2_00842	0.58	+0.4
865,251	+		EFB2_00842	0.58	-0.1
865,252	-		EFB2_00842	0.58	-2.2
865,252	-		EFB2_00842	0.58	+0.6
865,302	+		EFB2_00842	0.64	+2.4
865,302	+		EFB2_00842	0.64	+2.1
865,302	+		EFB2_00842	0.64	-0.5
865,302	+		EFB2_00842	0.64	+0.9
865,303	-		EFB2_00842	0.64	+0.3
865,303	-		EFB2_00842	0.64	-1.2
865,303	-		EFB2_00842	0.64	+0.3
865,303	-		EFB2_00842	0.64	-0.3
865,303	-		EFB2_00842	0.64	+0.6
865,336	+		EFB2_00842	0.68	+1.4
865,336	+		EFB2_00842	0.68	-0.3
865,337	-		EFB2_00842	0.69	-0.6
865,339	+		EFB2_00842	0.69	+0.2
865,339	+		EFB2_00842	0.69	-1.1
865,339	+		EFB2_00842	0.69	-1.4
865,340	-		EFB2_00842	0.69	-0.2
865,340	-		EFB2_00842	0.69	-1.2
865,340	-		EFB2_00842	0.69	-1.3
865,340	-		EFB2_00842	0.69	+0.9
865,340	-		EFB2_00842	0.69	+0.7
865,340	-		EFB2_00842	0.69	-0.4
865,340	-		EFB2_00842	0.69	-0.3
865,346	+		EFB2_00842	0.70	+0.6
865,347	-		EFB2_00842	0.70	-1.9
865,362	+		EFB2_00842	0.72	-1.2
865,371	+		EFB2_00842	0.73	+2.1
865,371	+		EFB2_00842	0.73	+0.9
865,372	-		EFB2_00842	0.73	-1.9
865,372	-		EFB2_00842	0.73	-0.6
865,372	-		EFB2_00842	0.73	-0.7
865,381	+		EFB2_00842	0.74	+0.1
865,381	+		EFB2_00842	0.74	-1.0
865,382	-		EFB2_00842	0.74	+1.0
865,392	+		EFB2_00842	0.75	+0.3
865,392	+		EFB2_00842	0.75	+0.1
865,392	+		EFB2_00842	0.75	-0.9
865,393	-		EFB2_00842	0.75	-0.9
865,393	-		EFB2_00842	0.75	+0.1
865,393	-		EFB2_00842	0.75	+1.8
865,407	+		EFB2_00842	0.77	-0.5
865,407	+		EFB2_00842	0.77	-0.7
865,407	+		EFB2_00842	0.77	-1.6
865,407	+		EFB2_00842	0.77	-0.2
865,407	+		EFB2_00842	0.77	+0.7
865,407	+		EFB2_00842	0.77	+1.4
865,407	+		EFB2_00842	0.77	-0.3
865,407	+		EFB2_00842	0.77	-0.5
865,407	+		EFB2_00842	0.77	+0.0
865,407	+		EFB2_00842	0.77	-1.6
865,407	+		EFB2_00842	0.77	-1.1
865,407	+		EFB2_00842	0.77	-0.1
865,407	+		EFB2_00842	0.77	+2.7
865,407	+		EFB2_00842	0.77	+0.4
865,407	+		EFB2_00842	0.77	+0.5
865,407	+		EFB2_00842	0.77	+0.2
865,407	+		EFB2_00842	0.77	+0.3
865,408	-		EFB2_00842	0.77	+0.4
865,408	-		EFB2_00842	0.77	+1.0
865,408	-		EFB2_00842	0.77	-0.7
865,408	-		EFB2_00842	0.77	-0.6
865,408	-		EFB2_00842	0.77	-0.5
865,408	-		EFB2_00842	0.77	-0.1
865,408	-		EFB2_00842	0.77	+0.5
865,408	-		EFB2_00842	0.77	+0.2
865,408	-		EFB2_00842	0.77	+5.7
865,408	-		EFB2_00842	0.77	+0.5
865,408	-		EFB2_00842	0.77	-0.9
865,408	-		EFB2_00842	0.77	+2.7
865,408	-		EFB2_00842	0.77	+0.3
865,408	-		EFB2_00842	0.77	-1.5
865,408	-		EFB2_00842	0.77	+0.9
865,410	+		EFB2_00842	0.78	-1.3
865,410	+		EFB2_00842	0.78	-0.6
865,410	+		EFB2_00842	0.78	-0.1
865,410	+		EFB2_00842	0.78	+0.3
865,411	-		EFB2_00842	0.78	-0.6
865,411	-		EFB2_00842	0.78	-1.1
865,411	-		EFB2_00842	0.78	-0.4
865,411	-		EFB2_00842	0.78	-0.1
865,411	-		EFB2_00842	0.78	+0.8
865,411	-		EFB2_00842	0.78	+0.8
865,411	-		EFB2_00842	0.78	+0.8
865,425	+		EFB2_00842	0.79	+0.0
865,425	+		EFB2_00842	0.79	-1.3
865,425	+		EFB2_00842	0.79	+0.4
865,426	-		EFB2_00842	0.80	+0.1
865,426	-		EFB2_00842	0.80	+0.2
865,491	+		EFB2_00842	0.88	+0.4
865,491	+		EFB2_00842	0.88	+0.1
865,491	+		EFB2_00842	0.88	+1.3
865,491	+		EFB2_00842	0.88	+1.1
865,491	+		EFB2_00842	0.88	-0.1
865,491	+		EFB2_00842	0.88	-0.6
865,491	+		EFB2_00842	0.88	-0.8
865,491	+		EFB2_00842	0.88	+0.5
865,492	-		EFB2_00842	0.88	-0.4
865,492	-		EFB2_00842	0.88	-0.9
865,492	-		EFB2_00842	0.88	-0.3
865,492	-		EFB2_00842	0.88	+0.8
865,492	-		EFB2_00842	0.88	+0.1
865,492	-		EFB2_00842	0.88	+0.8
865,492	-		EFB2_00842	0.88	-0.6
865,492	-		EFB2_00842	0.88	-0.6
865,492	-		EFB2_00842	0.88	-1.8
865,493	+		EFB2_00842	0.88	+0.2
865,493	+		EFB2_00842	0.88	+0.3
865,493	+		EFB2_00842	0.88	+0.6
865,493	+		EFB2_00842	0.88	+0.3
865,493	+		EFB2_00842	0.88	+1.1
865,494	-		EFB2_00842	0.88	+0.7
865,494	-		EFB2_00842	0.88	+0.2
865,494	-		EFB2_00842	0.88	+2.1
865,494	-		EFB2_00842	0.88	+0.8
865,494	-		EFB2_00842	0.88	-0.3
865,494	-		EFB2_00842	0.88	-0.3
865,494	-		EFB2_00842	0.88	+1.6
865,494	-		EFB2_00842	0.88	+0.6
865,494	-		EFB2_00842	0.88	+0.1
865,494	-		EFB2_00842	0.88	-1.4
865,494	-		EFB2_00842	0.88	-0.0
865,505	-		EFB2_00842	0.89	-1.2
865,560	+				-0.3
865,561	-				-1.0
865,561	-				-1.9
865,561	-				-0.4
865,571	+				+0.9
865,576	-				+0.9
865,596	-				+2.5
865,623	+				-2.2
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