Experiment: Amylopectin from Potato 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00203 and BACOVA_00204 are separated by 8 nucleotides BACOVA_00204 and BACOVA_00205 are separated by 28 nucleotides BACOVA_00205 and BACOVA_00206 are separated by 102 nucleotides
BACOVA_00203: BACOVA_00203 - DNA polymerase III, beta subunit, at 20,044 to 21,168
_00203
BACOVA_00204: BACOVA_00204 - hypothetical protein, at 21,177 to 21,293
_00204
BACOVA_00205: BACOVA_00205 - hypothetical protein, at 21,322 to 21,696
_00205
BACOVA_00206: BACOVA_00206 - hypothetical protein, at 21,799 to 23,373
_00206
Position (kb)
21
22 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 21.694 kb on + strand at 21.695 kb on - strand at 21.721 kb on + strand at 21.743 kb on - strand at 21.771 kb on + strand at 21.783 kb on - strand at 21.786 kb on + strand at 21.786 kb on + strand at 21.786 kb on + strand at 21.787 kb on - strand at 21.810 kb on + strand at 21.835 kb on + strand at 21.835 kb on + strand at 21.836 kb on - strand at 21.836 kb on - strand at 21.839 kb on - strand at 21.849 kb on + strand at 21.984 kb on - strand, within BACOVA_00206 at 22.033 kb on - strand, within BACOVA_00206 at 22.064 kb on + strand, within BACOVA_00206 at 22.064 kb on + strand, within BACOVA_00206 at 22.077 kb on + strand, within BACOVA_00206 at 22.096 kb on + strand, within BACOVA_00206 at 22.125 kb on - strand, within BACOVA_00206 at 22.164 kb on + strand, within BACOVA_00206 at 22.168 kb on + strand, within BACOVA_00206 at 22.199 kb on + strand, within BACOVA_00206 at 22.199 kb on + strand, within BACOVA_00206 at 22.199 kb on + strand, within BACOVA_00206 at 22.210 kb on + strand, within BACOVA_00206 at 22.211 kb on - strand, within BACOVA_00206 at 22.215 kb on + strand, within BACOVA_00206 at 22.218 kb on - strand, within BACOVA_00206 at 22.227 kb on + strand, within BACOVA_00206 at 22.266 kb on + strand, within BACOVA_00206 at 22.351 kb on - strand, within BACOVA_00206 at 22.351 kb on - strand, within BACOVA_00206 at 22.423 kb on - strand, within BACOVA_00206 at 22.423 kb on - strand, within BACOVA_00206 at 22.506 kb on + strand, within BACOVA_00206 at 22.526 kb on + strand, within BACOVA_00206 at 22.597 kb on - strand, within BACOVA_00206 at 22.644 kb on + strand, within BACOVA_00206 at 22.644 kb on + strand, within BACOVA_00206
Per-strain Table
Position Strand Gene LocusTag Fraction Amylopectin from Potato 2.5 mg/mL (C) remove 21,694 + -0.1 21,695 - -0.1 21,721 + +0.4 21,743 - +0.4 21,771 + -1.5 21,783 - +0.5 21,786 + +0.6 21,786 + +0.3 21,786 + -0.7 21,787 - -0.8 21,810 + +0.6 21,835 + +1.7 21,835 + -0.0 21,836 - +1.2 21,836 - +0.8 21,839 - +1.2 21,849 + +2.6 21,984 - BACOVA_00206 0.12 +0.1 22,033 - BACOVA_00206 0.15 +0.4 22,064 + BACOVA_00206 0.17 +1.4 22,064 + BACOVA_00206 0.17 -1.4 22,077 + BACOVA_00206 0.18 +0.1 22,096 + BACOVA_00206 0.19 -0.8 22,125 - BACOVA_00206 0.21 -1.5 22,164 + BACOVA_00206 0.23 -0.1 22,168 + BACOVA_00206 0.23 +0.6 22,199 + BACOVA_00206 0.25 +1.0 22,199 + BACOVA_00206 0.25 +1.1 22,199 + BACOVA_00206 0.25 +0.2 22,210 + BACOVA_00206 0.26 +0.7 22,211 - BACOVA_00206 0.26 -2.3 22,215 + BACOVA_00206 0.26 +0.3 22,218 - BACOVA_00206 0.27 -0.5 22,227 + BACOVA_00206 0.27 +0.9 22,266 + BACOVA_00206 0.30 -0.1 22,351 - BACOVA_00206 0.35 -0.3 22,351 - BACOVA_00206 0.35 +0.5 22,423 - BACOVA_00206 0.40 +0.3 22,423 - BACOVA_00206 0.40 -2.3 22,506 + BACOVA_00206 0.45 +0.6 22,526 + BACOVA_00206 0.46 -1.4 22,597 - BACOVA_00206 0.51 +1.4 22,644 + BACOVA_00206 0.54 -1.0 22,644 + BACOVA_00206 0.54 -0.1
Or see this region's nucleotide sequence