Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00187

Experiment: Amylopectin from Potato 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato 2.5 mg/mL (C)
733	+		BACOVA_00186	0.11	-0.1
733	+		BACOVA_00186	0.11	-0.3
733	+		BACOVA_00186	0.11	+0.5
735	+		BACOVA_00186	0.11	-0.2
736	-		BACOVA_00186	0.11	-0.3
736	-		BACOVA_00186	0.11	-0.6
752	-		BACOVA_00186	0.13	-1.1
778	+		BACOVA_00186	0.15	-1.0
783	+		BACOVA_00186	0.16	+1.0
784	-		BACOVA_00186	0.16	-0.9
788	-		BACOVA_00186	0.16	+0.6
826	+		BACOVA_00186	0.20	-0.4
826	+		BACOVA_00186	0.20	-0.1
826	+		BACOVA_00186	0.20	+0.7
826	+		BACOVA_00186	0.20	-0.8
827	-		BACOVA_00186	0.20	+1.3
827	-		BACOVA_00186	0.20	+0.4
851	+		BACOVA_00186	0.23	-1.0
855	-		BACOVA_00186	0.23	-1.8
893	+		BACOVA_00186	0.27	+0.2
911	-		BACOVA_00186	0.29	-2.0
913	+		BACOVA_00186	0.29	+1.2
952	-		BACOVA_00186	0.33	+0.7
954	+		BACOVA_00186	0.33	-0.6
955	-		BACOVA_00186	0.33	-0.7
958	+		BACOVA_00186	0.33	+0.2
959	-		BACOVA_00186	0.33	-1.1
959	-		BACOVA_00186	0.33	+0.2
1,012	+		BACOVA_00186	0.39	+0.2
1,041	+		BACOVA_00186	0.42	-1.4
1,041	+		BACOVA_00186	0.42	-0.6
1,042	-		BACOVA_00186	0.42	-0.7
1,042	-		BACOVA_00186	0.42	-0.7
1,045	+		BACOVA_00186	0.42	-2.4
1,052	-		BACOVA_00186	0.43	-1.2
1,052	-		BACOVA_00186	0.43	-0.3
1,085	-		BACOVA_00186	0.46	-0.8
1,086	+		BACOVA_00186	0.46	+1.3
1,086	+		BACOVA_00186	0.46	-2.5
1,100	+		BACOVA_00186	0.47	+2.4
1,100	+		BACOVA_00186	0.47	+0.3
1,100	+		BACOVA_00186	0.47	-0.3
1,101	-		BACOVA_00186	0.48	-0.9
1,109	-		BACOVA_00186	0.48	-0.7
1,109	-		BACOVA_00186	0.48	+0.8
1,180	+		BACOVA_00186	0.55	-0.6
1,199	+		BACOVA_00186	0.57	+0.5
1,248	+		BACOVA_00186	0.62	-1.0
1,248	+		BACOVA_00186	0.62	+2.0
1,255	+		BACOVA_00186	0.63	-2.5
1,255	+		BACOVA_00186	0.63	-0.1
1,256	-		BACOVA_00186	0.63	-1.1
1,256	-		BACOVA_00186	0.63	-1.3
1,262	-		BACOVA_00186	0.64	-0.6
1,322	-		BACOVA_00186	0.70	-1.1
1,380	+		BACOVA_00186	0.75	-2.6
1,422	+		BACOVA_00186	0.80	+1.4
1,506	+		BACOVA_00186	0.88	-2.5
1,512	+		BACOVA_00186	0.88	-0.4
1,512	+		BACOVA_00186	0.88	-0.8
1,513	-		BACOVA_00186	0.89	-1.2
1,555	+				-0.4
1,630	+				+1.9
1,636	+				-0.4
1,667	-				-0.2
1,703	-				+0.7
1,703	-				+0.8
1,705	-				+1.3
1,720	+				-1.9
1,721	-				-1.1
1,729	+				+1.2
1,734	-				-2.0
1,770	+				-0.6
1,826	+				+0.5
1,838	+				-0.8
1,839	-				+1.0
1,839	-				+0.2
1,843	+				+0.6
1,847	-				+2.3
1,853	-				-2.1
1,856	+				-0.4
1,856	+				-0.0
1,919	+		BACOVA_00187	0.13	-2.4
1,922	-		BACOVA_00187	0.13	+1.6
1,922	-		BACOVA_00187	0.13	+1.4
1,935	-		BACOVA_00187	0.14	-0.0
1,939	-		BACOVA_00187	0.14	+1.0
1,991	+		BACOVA_00187	0.18	-0.1
2,000	+		BACOVA_00187	0.18	-1.0
2,008	-		BACOVA_00187	0.19	-1.1
2,008	-		BACOVA_00187	0.19	-0.1
2,009	+		BACOVA_00187	0.19	+0.1
2,010	-		BACOVA_00187	0.19	-0.1
2,010	-		BACOVA_00187	0.19	-1.5
2,012	+		BACOVA_00187	0.19	-2.1
2,041	+		BACOVA_00187	0.21	+1.2
2,041	+		BACOVA_00187	0.21	-0.0
2,041	+		BACOVA_00187	0.21	+0.4
2,043	+		BACOVA_00187	0.21	-0.2
2,043	+		BACOVA_00187	0.21	-2.1
2,051	-		BACOVA_00187	0.22	-1.3
2,065	+		BACOVA_00187	0.23	-0.2
2,067	+		BACOVA_00187	0.23	-0.6
2,067	+		BACOVA_00187	0.23	+1.3
2,076	-		BACOVA_00187	0.23	+0.5
2,082	-		BACOVA_00187	0.24	-0.1
2,082	-		BACOVA_00187	0.24	+1.5
2,108	+		BACOVA_00187	0.25	-1.1
2,109	-		BACOVA_00187	0.25	+0.9
2,155	+		BACOVA_00187	0.28	+0.1
2,156	-		BACOVA_00187	0.28	-0.5
2,156	-		BACOVA_00187	0.28	+2.0
2,174	+		BACOVA_00187	0.30	+0.9
2,175	-		BACOVA_00187	0.30	-1.0
2,197	+		BACOVA_00187	0.31	+1.1
2,198	-		BACOVA_00187	0.31	+1.9
2,210	+		BACOVA_00187	0.32	+0.4
2,210	+		BACOVA_00187	0.32	-0.9
2,223	+		BACOVA_00187	0.33	-3.1
2,224	-		BACOVA_00187	0.33	-1.1
2,243	+		BACOVA_00187	0.34	+0.4
2,256	-		BACOVA_00187	0.35	+0.8
2,330	-		BACOVA_00187	0.40	+0.8
2,330	-		BACOVA_00187	0.40	-0.9
2,332	-		BACOVA_00187	0.40	+0.3
2,362	+		BACOVA_00187	0.42	+0.4
2,396	-		BACOVA_00187	0.44	+1.2
2,405	-		BACOVA_00187	0.45	+0.3
2,414	-		BACOVA_00187	0.45	+0.7
2,429	+		BACOVA_00187	0.46	-0.0
2,454	-		BACOVA_00187	0.48	-1.4
2,487	+		BACOVA_00187	0.50	-0.9
2,498	+		BACOVA_00187	0.51	-0.6
2,527	+		BACOVA_00187	0.52	-1.0
2,534	-		BACOVA_00187	0.53	+0.5
2,534	-		BACOVA_00187	0.53	-1.6
2,599	-		BACOVA_00187	0.57	-0.1
2,603	+		BACOVA_00187	0.57	+0.6
2,654	-		BACOVA_00187	0.61	-2.3
2,654	-		BACOVA_00187	0.61	-0.2
2,671	+		BACOVA_00187	0.62	-0.2
2,671	+		BACOVA_00187	0.62	-0.3
2,671	+		BACOVA_00187	0.62	-0.9
2,672	-		BACOVA_00187	0.62	+0.6
2,697	+		BACOVA_00187	0.63	+0.4
2,697	+		BACOVA_00187	0.63	+1.8
2,699	+		BACOVA_00187	0.64	+0.7
2,751	-		BACOVA_00187	0.67	-2.7
2,768	+		BACOVA_00187	0.68	-1.3
2,791	-		BACOVA_00187	0.70	-1.4
2,792	+		BACOVA_00187	0.70	+0.1
2,793	-		BACOVA_00187	0.70	-0.4
2,798	-		BACOVA_00187	0.70	-0.6
2,826	+		BACOVA_00187	0.72	-1.7
2,838	-		BACOVA_00187	0.73	-1.0
2,841	-		BACOVA_00187	0.73	+0.7
2,845	+		BACOVA_00187	0.73	-0.9
2,846	-		BACOVA_00187	0.73	-0.6
2,857	+		BACOVA_00187	0.74	-1.4
2,857	+		BACOVA_00187	0.74	-0.9
2,858	-		BACOVA_00187	0.74	-1.9
2,866	+		BACOVA_00187	0.74	+0.1
2,866	+		BACOVA_00187	0.74	-0.9
2,871	+		BACOVA_00187	0.75	-1.3
2,906	-		BACOVA_00187	0.77	-0.1
2,911	+		BACOVA_00187	0.77	+1.2
2,911	+		BACOVA_00187	0.77	+0.6
2,915	+		BACOVA_00187	0.78	+0.6
2,916	-		BACOVA_00187	0.78	-0.2
2,938	-		BACOVA_00187	0.79	+0.5
2,959	+		BACOVA_00187	0.80	+1.0
2,960	-		BACOVA_00187	0.80	-0.6
3,079	+		BACOVA_00187	0.88	-1.2
3,106	+		BACOVA_00187	0.90	-3.9
3,107	-		BACOVA_00187	0.90	-2.6
3,107	-		BACOVA_00187	0.90	+0.7
3,139	-				+0.7
3,139	-				-0.5
3,203	-				-1.8
3,254	-				-2.1
3,254	-				-0.6
3,262	+				-0.3
3,262	+				-0.4
3,262	+				+0.4
3,263	-				+0.8
3,344	-				+1.2
3,351	+				+1.2
3,391	+				-0.3
3,391	+				-0.1
3,391	+				+2.2
3,396	+				-0.4
3,397	-				-0.8
3,397	-				+0.3
3,399	+				+0.4
3,400	-				+1.5
3,424	+				+0.8
3,425	-				-0.8
3,455	-				+0.3
3,477	+		BACOVA_00188	0.11	+1.1
3,511	+		BACOVA_00188	0.16	+0.6
3,512	-		BACOVA_00188	0.17	-0.8
3,554	+		BACOVA_00188	0.23	+0.6
3,578	+		BACOVA_00188	0.27	-1.3
3,578	+		BACOVA_00188	0.27	-1.7
3,590	+		BACOVA_00188	0.29	-1.7
3,591	-		BACOVA_00188	0.29	-0.8
3,591	-		BACOVA_00188	0.29	+1.3
3,591	-		BACOVA_00188	0.29	+3.0
3,591	-		BACOVA_00188	0.29	-0.6
3,591	-		BACOVA_00188	0.29	-0.2
3,594	-		BACOVA_00188	0.29	+2.8
3,606	-		BACOVA_00188	0.31	+1.5
3,606	-		BACOVA_00188	0.31	+0.1
3,618	+		BACOVA_00188	0.33	+0.0
3,619	-		BACOVA_00188	0.33	+1.7
3,639	+		BACOVA_00188	0.36	-1.6
3,640	-		BACOVA_00188	0.36	+1.5
3,640	-		BACOVA_00188	0.36	-0.8
3,640	-		BACOVA_00188	0.36	-0.1
3,641	+		BACOVA_00188	0.36	+2.2
3,641	+		BACOVA_00188	0.36	+1.2
3,642	-		BACOVA_00188	0.37	-1.7
3,656	+		BACOVA_00188	0.39	-0.1
3,677	+		BACOVA_00188	0.42	+0.4
3,709	-		BACOVA_00188	0.47	-1.1
3,711	+		BACOVA_00188	0.47	+0.2
3,712	-		BACOVA_00188	0.47	-0.4
3,713	+		BACOVA_00188	0.48	-2.0
3,713	+		BACOVA_00188	0.48	+0.3
3,828	+		BACOVA_00188	0.65	+0.0
3,832	-		BACOVA_00188	0.66	-1.3
3,849	-		BACOVA_00188	0.69	-1.7
3,849	-		BACOVA_00188	0.69	-1.2
3,863	+		BACOVA_00188	0.71	-0.4
3,878	-		BACOVA_00188	0.73	-2.2
3,946	-		BACOVA_00188	0.83	+0.0
3,971	+		BACOVA_00188	0.87	+1.0
3,995	+				+0.7
3,996	-				+0.9
3,996	-				+0.2
4,052	+				+0.3
4,053	-				-1.3
4,058	+				-1.1
4,116	+				+1.3
4,159	+				-0.6
4,162	+				+1.4
4,220	-		BACOVA_00189	0.12	+0.8
4,234	-		BACOVA_00189	0.13	+1.3