Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5387

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
2,389,716	-		GFF5386	0.65	-0.3
2,389,927	+		GFF5386	0.80	-0.9
2,390,109	-				-0.5
2,390,220	+				-0.3
2,390,220	+				+0.5
2,390,221	-				+0.3
2,390,221	-				+0.9
2,390,524	-		GFF5387	0.39	-0.3
2,390,805	+		GFF5387	0.77	+1.2
2,390,805	+		GFF5387	0.77	+1.2
2,391,662	+		GFF5388	0.79	+0.6
2,391,672	-		GFF5388	0.80	-0.3
2,391,896	+				+1.3
2,391,970	+				+0.4