Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5284

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
2,294,224	+		GFF5281	0.48	+0.1
2,294,224	+		GFF5281	0.48	-0.8
2,294,225	-		GFF5281	0.48	+0.8
2,294,374	+		GFF5281	0.88	+0.4
2,294,375	-		GFF5281	0.88	+0.1
2,294,375	-		GFF5281	0.88	-0.5
2,294,384	-				+1.0
2,294,589	+		GFF5282	0.40	-0.2
2,294,589	+		GFF5282	0.40	-0.4
2,294,590	-		GFF5282	0.41	+0.1
2,294,598	+		GFF5282	0.42	-0.3
2,294,625	+		GFF5282	0.49	+0.2
2,294,625	+		GFF5282	0.49	+0.9
2,294,626	-		GFF5282	0.49	-1.3
2,294,626	-		GFF5282	0.49	-2.0
2,294,709	+		GFF5282	0.69	-1.3
2,294,995	+		GFF5283	0.28	-0.1
2,295,127	+		GFF5283	0.75	-0.1
2,295,127	+		GFF5283	0.75	-0.3
2,295,148	+		GFF5283	0.82	-0.4
2,295,225	-				-0.2
2,295,270	-				-0.5
2,295,324	-				-1.1
2,295,324	-				-0.2
2,295,567	+		GFF5284	0.13	-1.7
2,295,567	+		GFF5284	0.13	-0.8
2,295,976	-		GFF5284	0.27	-1.3
2,296,097	+		GFF5284	0.31	-0.9
2,296,098	-		GFF5284	0.31	-0.6
2,296,500	-		GFF5284	0.45	+0.8
2,296,500	-		GFF5284	0.45	-1.0
2,296,940	+		GFF5284	0.60	+0.1
2,296,940	+		GFF5284	0.60	-1.5
2,296,940	+		GFF5284	0.60	+0.3
2,298,038	+				-0.7
2,298,554	+		GFF5286	0.30	-1.0
2,298,555	-		GFF5286	0.30	-0.2
2,298,555	-		GFF5286	0.30	-0.2
2,298,557	+		GFF5286	0.31	+0.1
2,298,747	-		GFF5286	0.76	+0.3
2,298,747	-		GFF5286	0.76	+0.5
2,298,938	-				+0.3